Biosynthesis and regulation of phenylpropanoids in plants
Y Deng, S Lu - Critical Reviews in Plant Sciences, 2017 - Taylor & Francis
Phenylpropanoids are a large class of plant secondary metabolites derived from aromatic
amino acids phenylalanine in most plants or tyrosine in partial monocots. It mainly includes …
amino acids phenylalanine in most plants or tyrosine in partial monocots. It mainly includes …
Revisiting criteria for plant microRNA annotation in the era of big data
Abstract MicroRNAs (miRNAs) are∼ 21-nucleotide-long regulatory RNAs that arise from
endonucleolytic processing of hairpin precursors. Many function as essential …
endonucleolytic processing of hairpin precursors. Many function as essential …
[HTML][HTML] One thousand plant transcriptomes and the phylogenomics of green plants
Nature, 2019 - nature.com
Green plants (Viridiplantae) include around 450,000–500,000 species, of great diversity and
have important roles in terrestrial and aquatic ecosystems. Here, as part of the One …
have important roles in terrestrial and aquatic ecosystems. Here, as part of the One …
[HTML][HTML] A super pan-genomic landscape of rice
L Shang, X Li, H He, Q Yuan, Y Song, Z Wei, H Lin… - Cell research, 2022 - nature.com
Pan-genomes from large natural populations can capture genetic diversity and reveal
genomic complexity. Using de novo long-read assembly, we generated a graph-based …
genomic complexity. Using de novo long-read assembly, we generated a graph-based …
[HTML][HTML] The Taxus genome provides insights into paclitaxel biosynthesis
The ancient gymnosperm genus Taxus is the exclusive source of the anticancer drug
paclitaxel, yet no reference genome sequences are available for comprehensively …
paclitaxel, yet no reference genome sequences are available for comprehensively …
[PDF][PDF] Insights into land plant evolution garnered from the Marchantia polymorpha genome
The evolution of land flora transformed the terrestrial environment. Land plants evolved from
an ancestral charophycean alga from which they inherited developmental, biochemical, and …
an ancestral charophycean alga from which they inherited developmental, biochemical, and …
LTR_retriever: a highly accurate and sensitive program for identification of long terminal repeat retrotransposons
Long terminal repeat retrotransposons (LTR-RTs) are prevalent in plant genomes. The
identification of LTR-RTs is critical for achieving high-quality gene annotation. Based on the …
identification of LTR-RTs is critical for achieving high-quality gene annotation. Based on the …
[HTML][HTML] The water lily genome and the early evolution of flowering plants
Water lilies belong to the angiosperm order Nymphaeales. Amborellales, Nymphaeales and
Austrobaileyales together form the so-called ANA-grade of angiosperms, which are extant …
Austrobaileyales together form the so-called ANA-grade of angiosperms, which are extant …
[HTML][HTML] Gene duplication and evolution in recurring polyploidization–diploidization cycles in plants
Background The sharp increase of plant genome and transcriptome data provide valuable
resources to investigate evolutionary consequences of gene duplication in a range of taxa …
resources to investigate evolutionary consequences of gene duplication in a range of taxa …
[HTML][HTML] Evolutionary history of Coleoptera revealed by extensive sampling of genes and species
Beetles (Coleoptera) are the most diverse and species-rich group of insects, and a robust,
time-calibrated phylogeny is fundamental to understanding macroevolutionary processes …
time-calibrated phylogeny is fundamental to understanding macroevolutionary processes …