[HTML][HTML] Nanomaterials to combat SARS-CoV-2: Strategies to prevent, diagnose and treat COVID-19

A Valenzuela-Fernández… - … in Bioengineering and …, 2022 - frontiersin.org
The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection and the
associated coronavirus disease 2019 (COVID-19), which severely affect the respiratory …

[HTML][HTML] Design of external quality assessment schemes and definition of the roles of their providers in future epidemics

C Buchta, H Zeichhardt, SW Aberle, JV Camp… - The Lancet …, 2023 - thelancet.com
During an epidemic, individual test results form the basis of epidemiological indicators such
as case numbers or incidence. Therefore, the accuracy of measures derived from these …

[HTML][HTML] Evaluation of a commercial SARS-CoV-2 multiplex PCR genotyping assay for variant identification in resource-scarce settings

CN Umunnakwe, ZN Makatini, M Maphanga… - Plos one, 2022 - journals.plos.org
The rapid emergence and spread of numerous severe acute respiratory syndrome
coronavirus 2 (SARS-CoV-2) variants across the globe underscores the crucial need for …

[HTML][HTML] SARS-CoV-2 variants in Paraguay: detection and surveillance with an economical and scalable molecular protocol

M Martinez, PV Nguyen, M Su, F Cardozo… - Viruses, 2022 - mdpi.com
SARS-CoV-2 variant detection relies on resource-intensive whole-genome sequencing
methods. We sought to develop a scalable protocol for variant detection and surveillance in …

[HTML][HTML] Inadequate design of mutation detection panels prevents interpretation of variants of concern: results of an external quality assessment for SARS-CoV-2 …

C Buchta, JV Camp, J Jovanovic, U Radler… - Clinical Chemistry and …, 2022 - degruyter.com
Objectives Mutation-specific PCR assays have quickly found their way into laboratory
diagnostics due to their capacity to be a fast, easy to implement and high-throughput method …

[HTML][HTML] Virus sequencing performance during the SARS-CoV-2 pandemic: a retrospective analysis of data from multiple rounds of external quality assessment in …

JV Camp, E Puchhammer-Stöckl, SW Aberle… - Frontiers in Molecular …, 2024 - frontiersin.org
Introduction: A notable feature of the 2019 coronavirus disease (COVID-19) pandemic was
the widespread use of whole genome sequencing (WGS) to monitor severe acute …

[HTML][HTML] Long term detection and quantification of SARS-CoV-2 RNA in wastewater in Bahrain

J Herrera-Uribe, P Naylor, E Rajab, B Mathews… - Journal of Hazardous …, 2022 - Elsevier
Wastewater-based epidemiology is a corroborated environmental surveillance tool in the
global fight against SARS-CoV-2. The analysis of wastewater for detection of SARS-CoV-2 …

Efficient SARS-CoV-2 Surveillance during the Pandemic-Endemic Transition Using PCR-Based Genotyping Assays

L Koets, K van Leeuwen, M Derlagen… - Microbiology …, 2023 - Am Soc Microbiol
Severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) variants of concern (VOC)
pose an increased risk to public health due to higher transmissibility and/or immune escape …

[HTML][HTML] Misidentification of the SARS-CoV-2 Mu variant using commercial mutation screening assays

I Alejo-Cancho, A Gual-de-Torrella, M Gallego… - Archives of …, 2022 - Springer
Detection of mutations by multiplex real-time RT-PCR is a widely used method for the
screening of SARS-CoV-2 variants, but this method has several limitations. We describe …

Ligation‐based assay for variant typing without sequencing: Application to SARS‐CoV‐2 variants of concern

DJ Nelson, MH Shilts, SB Pakala… - Influenza and Other …, 2023 - Wiley Online Library
Background COVID‐19 prevalence has remained high throughout the pandemic with
intermittent surges, due largely to the emergence of genetic variants, demonstrating the …