Dissipative structures in biological systems: bistability, oscillations, spatial patterns and waves

A Goldbeter - … Transactions of the Royal Society A …, 2018 - royalsocietypublishing.org
The goal of this review article is to assess how relevant is the concept of dissipative structure
for understanding the dynamical bases of non-equilibrium self-organization in biological …

Studies of Turing pattern formation in zebrafish skin

S Kondo, M Watanabe… - … Transactions of the …, 2021 - royalsocietypublishing.org
Skin patterns are the first example of the existence of Turing patterns in living organisms.
Extensive research on zebrafish, a model organism with stripes on its skin, has revealed the …

Topological data analysis of zebrafish patterns

MR McGuirl, A Volkening… - Proceedings of the …, 2020 - National Acad Sciences
Self-organized pattern behavior is ubiquitous throughout nature, from fish schooling to
collective cell dynamics during organism development. Qualitatively these patterns display …

Long-distance communication by specialized cellular projections during pigment pattern development and evolution

DS Eom, EJ Bain, LB Patterson, ME Grout, DM Parichy - Elife, 2015 - elifesciences.org
Changes in gene activity are essential for evolutionary diversification. Yet, elucidating the
cellular behaviors that underlie modifications to adult form remains a profound challenge …

Gap junctional signaling in pattern regulation: physiological network connectivity instructs growth and form

J Mathews, M Levin - Developmental neurobiology, 2017 - Wiley Online Library
Gap junctions (GJs) are aqueous channels that allow cells to communicate via physiological
signals directly. The role of gap junctional connectivity in determining single‐cell functions …

Modelling stripe formation in zebrafish: an agent-based approach

A Volkening, B Sandstede - Journal of the Royal Society …, 2015 - royalsocietypublishing.org
Zebrafish have distinctive black stripes and yellow interstripes that form owing to the
interaction of different pigment cells. We present a two-population agent-based model for the …

A quantitative modelling approach to zebrafish pigment pattern formation

JP Owen, RN Kelsh, CA Yates - Elife, 2020 - elifesciences.org
Pattern formation is a key aspect of development. Adult zebrafish exhibit a striking striped
pattern generated through the self-organisation of three different chromatophores …

[HTML][HTML] Iridophores as a source of robustness in zebrafish stripes and variability in Danio patterns

A Volkening, B Sandstede - Nature communications, 2018 - nature.com
Zebrafish (Danio rerio) feature black and yellow stripes, while related Danios display
different patterns. All these patterns form due to the interactions of pigment cells, which self …

The present and future of Turing models in developmental biology

S Kondo - Development, 2022 - journals.biologists.com
The Turing model (or reaction-diffusion model), first published in 1952, is a mathematical
model that can account for autonomy in the morphogenesis of organisms. Although initially …

Dissipative structures and biological rhythms

A Goldbeter - Chaos: An Interdisciplinary Journal of Nonlinear …, 2017 - pubs.aip.org
Sustained oscillations abound in biological systems. They occur at all levels of biological
organization over a wide range of periods, from a fraction of a second to years, and with a …