Fungal secondary metabolism: regulation, function and drug discovery

NP Keller - Nature Reviews Microbiology, 2019 - nature.com
One of the exciting movements in microbial sciences has been a refocusing and
revitalization of efforts to mine the fungal secondary metabolome. The magnitude of …

[HTML][HTML] Safety of the fungal workhorses of industrial biotechnology: update on the mycotoxin and secondary metabolite potential of Aspergillus niger, Aspergillus …

JC Frisvad, LLH Møller, TO Larsen, R Kumar… - Applied Microbiology …, 2018 - Springer
This review presents an update on the current knowledge of the secondary metabolite
potential of the major fungal species used in industrial biotechnology, ie, Aspergillus niger …

Clinker & clustermap. js: Automatic generation of gene cluster comparison figures

CLM Gilchrist, YH Chooi - Bioinformatics, 2021 - academic.oup.com
Genes involved in biological pathways are often collocalised in gene clusters, the
comparison of which can give valuable insights into their function and evolutionary history …

A computational framework to explore large-scale biosynthetic diversity

JC Navarro-Muñoz, N Selem-Mojica… - Nature chemical …, 2020 - nature.com
Genome mining has become a key technology to exploit natural product diversity. Although
initially performed on a single-genome basis, the process is now being scaled up to mine …

Molecules from nature: Reconciling biodiversity conservation and global healthcare imperatives for sustainable use of medicinal plants and fungi

MJR Howes, CL Quave, J Collemare… - Plants, People …, 2020 - Wiley Online Library
Societal Impact Statement Plants and fungi have provided, or inspired, key pharmaceuticals
for global health challenges, including cancer, heart disease, dementia, and malaria, and …

Prospects for antibacterial discovery and development

TM Privalsky, AM Soohoo, J Wang… - Journal of the …, 2021 - ACS Publications
The rising prevalence of multidrug-resistant bacteria is an urgent health crisis that can only
be countered through renewed investment in the discovery and development of antibiotics …

BiG-SLiCE: A highly scalable tool maps the diversity of 1.2 million biosynthetic gene clusters

SA Kautsar, JJJ van der Hooft, D de Ridder… - …, 2021 - academic.oup.com
Background Genome mining for biosynthetic gene clusters (BGCs) has become an integral
part of natural product discovery. The> 200,000 microbial genomes now publicly available …

An interpreted atlas of biosynthetic gene clusters from 1,000 fungal genomes

MT Robey, LK Caesar, MT Drott… - Proceedings of the …, 2021 - National Acad Sciences
Fungi are prolific producers of natural products, compounds which have had a large societal
impact as pharmaceuticals, mycotoxins, and agrochemicals. Despite the availability of over …

[HTML][HTML] A comparative genomics study of 23 Aspergillus species from section Flavi

I Kjærbølling, T Vesth, JC Frisvad, JL Nybo… - Nature …, 2020 - nature.com
Section Flavi encompasses both harmful and beneficial Aspergillus species, such as
Aspergillus oryzae, used in food fermentation and enzyme production, and Aspergillus …

[HTML][HTML] Investigation of inter- and intraspecies variation through genome sequencing of Aspergillus section Nigri

TC Vesth, JL Nybo, S Theobald, JC Frisvad… - Nature Genetics, 2018 - nature.com
Aspergillus section Nigri comprises filamentous fungi relevant to biomedicine, bioenergy,
health, and biotechnology. To learn more about what genetically sets these species apart …