Disease resistance gene analogs (RGAs) in plants

MK Sekhwal, P Li, I Lam, X Wang, S Cloutier… - International journal of …, 2015 - mdpi.com
Plants have developed effective mechanisms to recognize and respond to infections caused
by pathogens. Plant resistance gene analogs (RGAs), as resistance (R) gene candidates …

Plant pangenomics: approaches, applications and advancements

MF Danilevicz, CGT Fernandez, JI Marsh… - Current opinion in plant …, 2020 - Elsevier
Highlights•Pan-genomes represent the complex genomic diversity found in plant
species.•Novel approaches are under development to enable more complex pan-genome …

RGAugury: a pipeline for genome-wide prediction of resistance gene analogs (RGAs) in plants

P Li, X Quan, G Jia, J Xiao, S Cloutier, FM You - BMC genomics, 2016 - Springer
Abstract Background Resistance gene analogs (RGAs), such as NBS-encoding proteins,
receptor-like protein kinases (RLKs) and receptor-like proteins (RLPs), are potential R …

Characterization of disease resistance genes in the Brassica napus pangenome reveals significant structural variation

A Dolatabadian, PE Bayer, S Tirnaz… - Plant biotechnology …, 2020 - Wiley Online Library
Methods based on single nucleotide polymorphism (SNP), copy number variation (CNV)
and presence/absence variation (PAV) discovery provide a valuable resource to study gene …

Variation in abundance of predicted resistance genes in the Brassica oleracea pangenome

PE Bayer, AA Golicz, S Tirnaz… - Plant Biotechnology …, 2019 - Wiley Online Library
Brassica oleracea is an important agricultural species encompassing many vegetable crops
including cabbage, cauliflower, broccoli and kale; however, it can be susceptible to a variety …

Smart breeding approaches in post-genomics era for developing climate-resilient food crops

RZ Naqvi, HA Siddiqui, MA Mahmood… - Frontiers in Plant …, 2022 - frontiersin.org
Improving the crop traits is highly required for the development of superior crop varieties to
deal with climate change and the associated abiotic and biotic stress challenges. Climate …

Genome‐wide association study discovered candidate genes of Verticillium wilt resistance in upland cotton (Gossypium hirsutum L.)

T Li, X Ma, N Li, L Zhou, Z Liu, H Han… - Plant biotechnology …, 2017 - Wiley Online Library
Verticillium wilt (VW), caused by infection by Verticillium dahliae, is considered one of the
most yield‐limiting diseases in cotton. To examine the genetic architecture of cotton VW …

The Cotton Apoplastic Protein CRR1 Stabilizes Chitinase 28 to Facilitate Defense against the Fungal Pathogen Verticillium dahliae

LB Han, YB Li, FX Wang, WY Wang, J Liu, JH Wu… - The Plant …, 2019 - academic.oup.com
The apoplast serves as the first battlefield between the plant hosts and invading microbes;
therefore, work on plant-pathogen interactions has increasingly focused on apoplastic …

[图书][B] Cotton breeding in the view of abiotic and biotic stresses: challenges and perspectives

V Kamburova, I Salakhutdinov, IY Abdurakhmonov - 2022 - intechopen.com
Global climate change manifested in average annual temperature rise and imbalance of
most natural factors, such as changes in annual mean rainfall, air humidity, average …

Transcriptomics reveals multiple resistance mechanisms against cotton leaf curl disease in a naturally immune cotton species, Gossypium arboreum

RZ Naqvi, SSA Zaidi, KP Akhtar, S Strickler… - Scientific reports, 2017 - nature.com
Cotton leaf curl disease (CLCuD), caused by cotton leaf curl viruses (CLCuVs), is among the
most devastating diseases in cotton. While the widely cultivated cotton species Gossypium …