Joint inference of clonal structure using single-cell genome and transcriptome sequencing data
Latest advancements in the high-throughput single-cell genome (scDNA) and transcriptome
(scRNA) sequencing technologies enabled cell-resolved investigation of tissue clones …
(scRNA) sequencing technologies enabled cell-resolved investigation of tissue clones …
Single-cell Genome-and-Transcriptome sequencing without upfront whole-genome amplification reveals cell state plasticity of melanoma subclones
K Theunis, S Vanuytven, F Rambow, D Brown… - bioRxiv, 2023 - biorxiv.org
Single-cell multi-omics methods are enabling the study of cell state diversity, which is largely
determined by the interplay of the genome, epigenome, and transcriptome. Here, we …
determined by the interplay of the genome, epigenome, and transcriptome. Here, we …
Учредители: Российская академия наук
АС КАРЯГИНА, ПА ОРЛОВА, АВ ЖУЛИНА… - Биохимия, 2022 - elibrary.ru
На основе предложенного ранее подхода синтезом в клетках Escherichia coli получены
гибридные рекомбинантные белки-потенциальные компоненты эпитопных вакцин …
гибридные рекомбинантные белки-потенциальные компоненты эпитопных вакцин …
Novel in-silico predicted matrikines are differential mediators of in vitro and in vivo cellular metabolism
N Jariwala, M Ozols, A Eckersley, B Mambwe… - bioRxiv, 2023 - biorxiv.org
The exogenous application of small peptides can beneficially affect clinical skin appearance
(wrinkles) and architecture (collagen and elastic fibre deposition and epidermal thickness) …
(wrinkles) and architecture (collagen and elastic fibre deposition and epidermal thickness) …
Tumoroscope: a probabilistic model for mapping cancer clones in tumor tissues
Spatial and genomic heterogeneity of tumors is the key for cancer progression, treatment,
and survival. However, a technology for direct mapping the clones in the tumor tissue based …
and survival. However, a technology for direct mapping the clones in the tumor tissue based …
Canopy2: tumor phylogeny inference by bulk DNA and single-cell RNA sequencing & Blinded and partially-unblinded sample size re-estimation for registry-based …
AMK Weideman - 2024 - cdr.lib.unc.edu
Canopy2: A phylogenetic tree can provide insight into a tumor's composition by tracing the
evolutionary lineage of tumor cells as they acquire mutations. We propose Canopy2, a …
evolutionary lineage of tumor cells as they acquire mutations. We propose Canopy2, a …
Simultaneous visualization of cells and marker genes from scRNA-seq studies
The complexity of scRNA-sequencing datasets highlights the urgent need for enhanced
clustering and visualization methods. Here, we propose Stardust, an iterative, force-directed …
clustering and visualization methods. Here, we propose Stardust, an iterative, force-directed …
Single-Cell Technologies: Advances in Single-Cell Migration and Multi-Omics
M Moarefian, AMD Capossela, R Eom, K Aran - GEN Biotechnology, 2022 - liebertpub.com
Single-cell responses to different cues are crucial for identifying the mechanisms underlying
biological processes to facilitate disease detection and therapeutic development. The …
biological processes to facilitate disease detection and therapeutic development. The …
Statistical Methods for Single-Cell Omics and Integrative Genomics
R Wang - 2021 - search.proquest.com
Whole genome single-cell DNA sequencing (scDNA-seq) enables characterization of copy
number profiles at the cellular level and holds great promise for deciphering tumor …
number profiles at the cellular level and holds great promise for deciphering tumor …
[图书][B] Inferring Intra-Tumor Heterogeneity from DNA Sequencing Data
MA Myers - 2022 - search.proquest.com
Cancer is a disease characterized by somatic mutations which accumulate over time and in
response to evolutionary pressures. As a result, tumors are composed of multiple distinct …
response to evolutionary pressures. As a result, tumors are composed of multiple distinct …