Biology of oral streptococci

J Abranches, L Zeng, JK Kajfasz, SR Palmer… - Microbiology …, 2018 - Am Soc Microbiol
Bacteria belonging to the genus Streptococcus are the first inhabitants of the oral cavity,
which can be acquired right after birth and thus play an important role in the assembly of the …

Disentangling interactions in the microbiome: a network perspective

M Layeghifard, DM Hwang, DS Guttman - Trends in microbiology, 2017 - cell.com
Microbiota are now widely recognized as being central players in the health of all organisms
and ecosystems, and subsequently have been the subject of intense study. However …

The evolution and changing ecology of the African hominid oral microbiome

JA Fellows Yates, IM Velsko, F Aron… - Proceedings of the …, 2021 - National Acad Sciences
The oral microbiome plays key roles in human biology, health, and disease, but little is
known about the global diversity, variation, or evolution of this microbial community. To …

Minimal PAM specificity of a highly similar SpCas9 ortholog

P Chatterjee, N Jakimo, JM Jacobson - Science advances, 2018 - science.org
RNA-guided DNA endonucleases of the CRISPR-Cas system are widely used for genome
engineering and thus have numerous applications in a wide variety of fields. CRISPR …

Oral commensal streptococci: gatekeepers of the oral cavity

JJ Baty, SN Stoner, JA Scoffield - Journal of Bacteriology, 2022 - Am Soc Microbiol
Oral commensal streptococci are primary colonizers of the oral cavity. These streptococci
produce many adhesins, metabolites, and antimicrobials that modulate microbial succession …

[HTML][HTML] A Cas9 with PAM recognition for adenine dinucleotides

P Chatterjee, J Lee, L Nip, SRT Koseki… - Nature …, 2020 - nature.com
Abstract CRISPR-associated (Cas) DNA-endonucleases are remarkably effective tools for
genome engineering, but have limited target ranges due to their protospacer adjacent motif …

[HTML][HTML] GET_PHYLOMARKERS, a software package to select optimal orthologous clusters for phylogenomics and inferring pan-genome phylogenies, used for a …

P Vinuesa, LE Ochoa-Sánchez… - Frontiers in …, 2018 - frontiersin.org
The massive accumulation of genome-sequences in public databases promoted the
proliferation of genome-level phylogenetic analyses in many areas of biological research …

[HTML][HTML] Genomes in turmoil: quantification of genome dynamics in prokaryote supergenomes

P Puigbò, AE Lobkovsky, DM Kristensen, YI Wolf… - BMC biology, 2014 - Springer
Background Genomes of bacteria and archaea (collectively, prokaryotes) appear to exist in
incessant flux, expanding via horizontal gene transfer and gene duplication, and contracting …

[HTML][HTML] The pathogenic factors from oral streptococci for systemic diseases

H Yumoto, K Hirota, K Hirao, M Ninomiya… - International journal of …, 2019 - mdpi.com
The oral cavity is suggested as the reservoir of bacterial infection, and the oral and
pharyngeal biofilms formed by oral bacterial flora, which is comprised of over 700 microbial …

[HTML][HTML] Competence in Streptococcus pneumoniae and Close Commensal Relatives: Mechanisms and Implications

G Salvadori, R Junges, DA Morrison… - Frontiers in cellular and …, 2019 - frontiersin.org
The mitis group of streptococci comprises species that are common colonizers of the naso-
oral-pharyngeal tract of humans. Streptococcus pneumoniae and Streptococcus mitis are …