Bacterial DNA methyltransferase: A key to the epigenetic world with lessons learned from proteobacteria
Q Gao, S Lu, Y Wang, L He, M Wang, R Jia… - Frontiers in …, 2023 - frontiersin.org
Epigenetics modulates expression levels of various important genes in both prokaryotes and
eukaryotes. These epigenetic traits are heritable without any change in genetic DNA …
eukaryotes. These epigenetic traits are heritable without any change in genetic DNA …
Species Delineation and Comparative Genomics within the Campylobacter ureolyticus Complex
JJ Maki, M Howard, S Connelly… - Journal of Clinical …, 2023 - Am Soc Microbiol
Campylobacter ureolyticus is an emerging pathogen increasingly appreciated as a common
cause of gastroenteritis and extra-intestinal infections in humans. Outside the setting of …
cause of gastroenteritis and extra-intestinal infections in humans. Outside the setting of …
Long‐Read Sequencing Reveals Extensive DNA Methylations in Human Gut Phagenome Contributed by Prevalently Phage‐Encoded Methyltransferases
C Sun, J Chen, M Jin, X Zhao, Y Li, Y Dong… - Advanced …, 2023 - Wiley Online Library
DNA methylation plays a crucial role in the survival of bacteriophages (phages), yet the
understanding of their genome methylation remains limited. In this study, DNA methylation …
understanding of their genome methylation remains limited. In this study, DNA methylation …
Comparative genomics and DNA methylation analysis of Pseudomonas aeruginosa clinical isolate PA3 by single-molecule real-time sequencing reveals new targets …
Z Li, X Zhou, D Liao, R Liu, X Zhao, J Wang… - Frontiers in Cellular …, 2023 - frontiersin.org
Introduction Pseudomonas aeruginosa (P. aeruginosa) is an important opportunistic
pathogen with broad environmental adaptability and complex drug resistance. Single …
pathogen with broad environmental adaptability and complex drug resistance. Single …
AamA-mediated epigenetic control of genome-wide gene expression and phenotypic traits in Acinetobacter baumannii ATCC 17978
Individual deletions of three genes encoding orphan DNA methyltransferases resulted in the
occurrence of growth defect only in the aamA (encoding A cinetobacter A denine M ethylase …
occurrence of growth defect only in the aamA (encoding A cinetobacter A denine M ethylase …
Extension of bacterial rDNA sequencing for simultaneous methylation detection and its application in microflora analysis
M Nishimura, T Tanaka, S Murata, A Miyabe… - Scientific Reports, 2023 - nature.com
Although polymerase chain reaction (PCR) amplification and sequencing of the bacterial
16S rDNA region has numerous scientific applications, it does not provide DNA methylation …
16S rDNA region has numerous scientific applications, it does not provide DNA methylation …
Bacmethy: A novel and convenient tool for investigating bacterial DNA methylation pattern and their transcriptional regulation effects
JH Liu, Y Zhang, N Zhou, J He, J Xu, Z Cai, L Yang… - iMeta, 2024 - Wiley Online Library
DNA methylation serves as the primary mode of epigenetic regulation in prokaryotes,
particularly through transcriptional regulation. With the rapid implementation of third …
particularly through transcriptional regulation. With the rapid implementation of third …
[HTML][HTML] Identification of anti-pathogenic activity among in silico predicted small-molecule inhibitors of Pseudomonas aeruginosa LasR or nitric oxide reductase (NOR)
Methods: In silico identification of potential LasR or NOR inhibitors was attempted through a
virtual screening platform AtomNet® to obtain a final subset of< 100 top scoring compounds …
virtual screening platform AtomNet® to obtain a final subset of< 100 top scoring compounds …
Developing new tools to fight human pathogens: A journey through the advances in RNA technologies
VG Costa, SM Costa, M Saramago, MV Cunha… - Microorganisms, 2022 - mdpi.com
A long scientific journey has led to prominent technological advances in the RNA field, and
several new types of molecules have been discovered, from non-coding RNAs (ncRNAs) to …
several new types of molecules have been discovered, from non-coding RNAs (ncRNAs) to …
Pathogens in engineered water systems
F Huang, Y Zhao, Y Su, R Gao, W Zhang… - Water Security: Big Data …, 2024 - Elsevier
The safe reuse of reclaimed water represents a pivotal solution for overcoming challenges
associated with water scarcity and pollution. However, engineered water systems such as …
associated with water scarcity and pollution. However, engineered water systems such as …