Microbial rhodopsins: the last two decades

A Rozenberg, K Inoue, H Kandori… - Annual review of …, 2021 - annualreviews.org
Microbial rhodopsins are diverse photoreceptive proteins containing a retinal chromophore
and are found in all domains of cellular life and are even encoded in genomes of viruses …

Microbial rhodopsins: diversity, mechanisms, and optogenetic applications

EG Govorunova, OA Sineshchekov, H Li… - Annual review of …, 2017 - annualreviews.org
Microbial rhodopsins are a family of photoactive retinylidene proteins widespread
throughout the microbial world. They are notable for their diversity of function, using …

A natural light-driven inward proton pump

K Inoue, S Ito, Y Kato, Y Nomura, M Shibata… - Nature …, 2016 - nature.com
Light-driven outward H+ pumps are widely distributed in nature, converting sunlight energy
into proton motive force. Here we report the characterization of an oppositely directed H+ …

Light-driven sodium-pumping rhodopsin: a new concept of active transport

H Kandori, K Inoue, SP Tsunoda - Chemical reviews, 2018 - ACS Publications
Ion pumps perform active transport of ions by using energy. The active transport mechanism
can be illustrated by the Panama Canal model, which considers two gates and a gain in …

Rhodopsins: an excitingly versatile protein species for research, development and creative engineering

WJ de Grip, S Ganapathy - Frontiers in Chemistry, 2022 - frontiersin.org
The first member and eponym of the rhodopsin family was identified in the 1930s as the
visual pigment of the rod photoreceptor cell in the animal retina. It was found to be a …

Microbial rhodopsins

V Gordeliy, K Kovalev, E Bamberg… - … : Methods and Protocols, 2022 - Springer
The first microbial rhodopsin, a light-driven proton pump bacteriorhodopsin from
Halobacterium salinarum (Hs BR), was discovered in 1971. Since then, this seven-α-helical …

The crystal structures of a chloride-pumping microbial rhodopsin and its proton-pumping mutant illuminate proton transfer determinants

JE Besaw, WL Ou, T Morizumi, BT Eger… - Journal of Biological …, 2020 - ASBMB
Microbial rhodopsins are versatile and ubiquitous retinal-binding proteins that function as
light-driven ion pumps, light-gated ion channels, and photosensors, with potential utility as …

Structure/function study of photoreceptive proteins by FTIR spectroscopy

H Kandori - Bulletin of the Chemical Society of Japan, 2020 - academic.oup.com
Light-induced difference Fourier-transform infrared (FTIR) spectroscopy is a powerful,
sensitive and informative method for studying protein structural changes in photoreceptive …

Optogenetic reprogramming of carbon metabolism using light-powering microbial proton pump systems

Y Toya, Y Hirono-Hara, H Hirayama, K Kamata… - Metabolic …, 2022 - Elsevier
In microbial fermentative production, ATP regeneration, while crucial for cellular processes,
conflicts with efficient target chemical production because ATP regeneration exhausts …

Engineering yeast with a light-driven proton pump system in the vacuolar membrane

KM Daicho, Y Hirono-Hara, H Kikukawa… - Microbial Cell …, 2024 - Springer
Background The supply of ATP is a limiting factor for cellular metabolism. Therefore, cell
factories require a sufficient ATP supply to drive metabolism for efficient bioproduction. In the …