Computational protein design for COVID-19 research and emerging therapeutics

P Kalita, T Tripathi, AK Padhi - ACS Central Science, 2023 - ACS Publications
As the world struggles with the ongoing COVID-19 pandemic, unprecedented obstacles
have continuously been traversed as new SARS-CoV-2 variants continually emerge …

[HTML][HTML] Applying the digital data and the bioinformatics tools in SARS-CoV-2 research

M Tan, J Xia, H Luo, G Meng, Z Zhu - Computational and Structural …, 2023 - Elsevier
Bioinformatics has been playing a crucial role in the scientific progress to fight against the
pandemic of the coronavirus disease 2019 (COVID-19) caused by the severe acute …

[HTML][HTML] The geography of open source software: evidence from github

J Wachs, M Nitecki, W Schueller, A Polleres - … Forecasting and Social …, 2022 - Elsevier
Abstract Open Source Software (OSS) plays an important role in the digital economy. Yet
although software production is amenable to remote collaboration and its outputs are digital …

A mixture model for determining SARS-Cov-2 variant composition in pooled samples

R Valieris, RD Drummond, A Defelicibus… - …, 2022 - academic.oup.com
Motivation Despite of the fast development of highly effective vaccines to control the current
COVID–19 pandemics, the unequal distribution and availability of these vaccines worldwide …

Multilevel systems biology analysis of lung transcriptomics data identifies key miRNAs and potential miRNA target genes for SARS-CoV-2 infection

B Banaganapalli, N Al-Rayes, ZA Awan… - Computers in Biology …, 2021 - Elsevier
Background The spread of a novel severe acute respiratory syndrome corona virus 2 (SARS-
CoV-2) has affected both the public health and the global economy. The current study was …

Evaluation of next generation sequencing approaches for SARS-CoV-2

V Curini, M Ancora, L Jurisic, V Di Lollo, B Secondini… - Heliyon, 2023 - cell.com
Within public health control strategies for SARS-CoV-2, whole genome sequencing (WGS) is
essential for tracking viral spread and monitoring the emergence of variants which may …

Evolution of Bioinformatics and its impact on modern bio-science in the twenty-first century: Special attention to pharmacology, plant science and drug discovery

D Mitra, D Mitra, MS Bensaad, S Sinha, K Pant… - Computational …, 2022 - Elsevier
Bioinformatics is inherently an innovative field that is situated at the limit of life and computer
sciences that allowed new technological advances in genome sequencing, data processing …

Molecular characterization of a new SARS-CoV-2 recombinant cluster XAG identified in Brazil

TS Silva, RS Salvato, TS Gregianini, IA Gomes… - Frontiers in …, 2022 - frontiersin.org
Recombination events have been described in the Coronaviridae family. Since the
beginning of the SARS-CoV-2 pandemic, a variable degree of selection pressure has acted …

Robust clinical detection of SARS‐CoV‐2 variants by RT‐PCR/MALDI‐TOF multitarget approach

MM Hernandez, R Banu… - Journal of medical …, 2022 - Wiley Online Library
Abstract The coronavirus disease 2019 (COVID‐19) pandemic has sparked the rapid
development of severe acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2) …

IHGC-GAN: influence hypergraph convolutional generative adversarial network for risk prediction of late mild cognitive impairment based on imaging genetic data

X Bi, L Li, Z Wang, Y Wang, X Luo… - Briefings in …, 2022 - academic.oup.com
Predicting disease progression in the initial stage to implement early intervention and
treatment can effectively prevent the further deterioration of the condition. Traditional …