Machine learning and deep learning applications in microbiome research
R Hernández Medina, S Kutuzova… - ISME …, 2022 - academic.oup.com
The many microbial communities around us form interactive and dynamic ecosystems called
microbiomes. Though concealed from the naked eye, microbiomes govern and influence …
microbiomes. Though concealed from the naked eye, microbiomes govern and influence …
[HTML][HTML] Bacteria-driven phthalic acid ester biodegradation: Current status and emerging opportunities
The extensive use of phthalic acid esters (PAEs) has led to their widespread distribution
across various environments. As PAEs pose significant threats to human health, it is urgent …
across various environments. As PAEs pose significant threats to human health, it is urgent …
[HTML][HTML] Cross-kingdom synthetic microbiota supports tomato suppression of Fusarium wilt disease
X Zhou, J Wang, F Liu, J Liang, P Zhao… - Nature …, 2022 - nature.com
The role of rhizosphere microbiota in the resistance of tomato plant against soil-borne
Fusarium wilt disease (FWD) remains unclear. Here, we showed that the FWD incidence …
Fusarium wilt disease (FWD) remains unclear. Here, we showed that the FWD incidence …
[HTML][HTML] The genomic landscape of reference genomes of cultivated human gut bacteria
X Lin, T Hu, J Chen, H Liang, J Zhou, Z Wu… - Nature …, 2023 - nature.com
Culture-independent metagenomic studies have revolutionized our understanding of the gut
microbiota. However, the lack of full genomes from cultured species is still a limitation for in …
microbiota. However, the lack of full genomes from cultured species is still a limitation for in …
[HTML][HTML] A social niche breadth score reveals niche range strategies of generalists and specialists
FAB von Meijenfeldt, P Hogeweg… - Nature Ecology & Evolution, 2023 - nature.com
Generalists can survive in many environments, whereas specialists are restricted to a single
environment. Although a classical concept in ecology, niche breadth has remained …
environment. Although a classical concept in ecology, niche breadth has remained …
Metabolomics and genomics in natural products research: complementary tools for targeting new chemical entities
Covering: 2010 to 2021 Organisms in nature have evolved into proficient synthetic chemists,
utilizing specialized enzymatic machinery to biosynthesize an inspiring diversity of …
utilizing specialized enzymatic machinery to biosynthesize an inspiring diversity of …
Metabolic exchanges are ubiquitous in natural microbial communities
Microbial communities drive global biogeochemical cycles and shape the health of plants
and animals—including humans. Their structure and function are determined by ecological …
and animals—including humans. Their structure and function are determined by ecological …
Harnessing the power of model organisms to unravel microbial functions in the coral holobiont
Stony corals build the framework of coral reefs, ecosystems of immense ecological and
economic importance. The existence of these ecosystems is threatened by climate change …
economic importance. The existence of these ecosystems is threatened by climate change …
Long-read metagenomics paves the way toward a complete microbial tree of life
M Albertsen - Nature Methods, 2023 - nature.com
Long-read metagenomics paves the way toward a complete microbial tree of life | Nature
Methods Skip to main content Thank you for visiting nature.com. You are using a browser …
Methods Skip to main content Thank you for visiting nature.com. You are using a browser …
Microbiota in tumors: from understanding to application
Microbes with complex functions have been found to be a potential component in tumor
microenvironments. Due to their low biomass and other obstacles, intratumor microbiota is …
microenvironments. Due to their low biomass and other obstacles, intratumor microbiota is …