CRISPR/Cas9 editing genome of extremophile Halomonas spp.

Q Qin, C Ling, Y Zhao, T Yang, J Yin, Y Guo… - Metabolic …, 2018 - Elsevier
Extremophiles are suitable chassis for developing the next generation industrial
biotechnology (NGIB) due to their resistance to microbial contamination. However …

Genetic tools for reliable gene expression and recombineering in Pseudomonas putida

TB Cook, JM Rand, W Nurani… - Journal of Industrial …, 2018 - academic.oup.com
Pseudomonas putida is a promising bacterial host for producing natural products, such as
polyketides and nonribosomal peptides. In these types of projects, researchers need a …

[HTML][HTML] Copy number variability of expression plasmids determined by cell sorting and Droplet Digital PCR

M Jahn, C Vorpahl, T Hübschmann, H Harms… - Microbial cell …, 2016 - Springer
Background Plasmids are widely used for molecular cloning or production of proteins in
laboratory and industrial settings. Constant modification has brought forth countless plasmid …

Muconic Acid Production Using Engineered Pseudomonas putida KT2440 and a Guaiacol-Rich Fraction Derived from Kraft Lignin

H Almqvist, H Veras, K Li… - ACS Sustainable …, 2021 - ACS Publications
Industrial lignin such as kraft lignin is an abundant feedstock for renewable chemicals and
materials. In this study, a process was developed for depolymerization of kraft lignin followed …

[HTML][HTML] Genome reduction boosts heterologous gene expression in Pseudomonas putida

S Lieder, PI Nikel, V de Lorenzo, R Takors - Microbial cell factories, 2015 - Springer
Background The implementation of novel platform organisms to be used as microbial cell
factories in industrial applications is currently the subject of intense research. Ongoing …

[HTML][HTML] Model-guided dynamic control of essential metabolic nodes boosts acetyl-coenzyme A–dependent bioproduction in rewired Pseudomonas putida

E Kozaeva, S Volkova, MRA Matos, MP Mezzina… - Metabolic …, 2021 - Elsevier
Pseudomonas putida is evolutionarily endowed with features relevant for bioproduction,
especially under harsh operating conditions. The rich metabolic versatility of this species …

[HTML][HTML] Synthetic control of plasmid replication enables target-and self-curing of vectors and expedites genome engineering of Pseudomonas putida

DC Volke, L Friis, NT Wirth, J Turlin, PI Nikel - Metabolic engineering …, 2020 - Elsevier
Genome engineering of non-conventional microorganisms calls for the development of
dedicated synthetic biology tools. Pseudomonas putida is a Gram-negative, non-pathogenic …

Programming Controlled Adhesion of E. coli to Target Surfaces, Cells, and Tumors with Synthetic Adhesins

C Piñero-Lambea, G Bodelón… - ACS synthetic …, 2015 - ACS Publications
In this work we report synthetic adhesins (SAs) enabling the rational design of the adhesion
properties of E. coli. SAs have a modular structure comprising a stable β-domain for outer …

CRISPR interference-guided balancing of a biosynthetic mevalonate pathway increases terpenoid production

SK Kim, GH Han, W Seong, H Kim, SW Kim, DH Lee… - Metabolic …, 2016 - Elsevier
Methods for simple and efficient regulation of metabolic pathway genes are essential for
maximizing product titers and conversion yields, and for minimizing the metabolic burden …

[HTML][HTML] Refactoring the upper sugar metabolism of Pseudomonas putida for co-utilization of cellobiose, xylose, and glucose

P Dvořák, V de Lorenzo - Metabolic engineering, 2018 - Elsevier
Given its capacity to tolerate stress, NAD (P) H/NAD (P) balance, and increased ATP levels,
the platform strain Pseudomonas putida EM42, a genome-edited derivative of the soil …