Applications of transcriptome in conifer species

J Wei, X Pei, X Hu, S Sun, C Zhao, R Han… - Plant Cell, Tissue and …, 2022 - Springer
High-throughput sequencing technology has been widely used and continuously optimized.
As one kind of high-throughput sequencing technology, RNA sequencing (RNA-seq) can …

Comparative transcriptome analysis identified candidate genes related to Bailinggu mushroom formation and genetic markers for genetic analyses and breeding

Y Fu, Y Dai, C Yang, P Wei, B Song, Y Yang, L Sun… - Scientific Reports, 2017 - nature.com
Bailinggu (Pleurotus tuoliensis) is a major, commercially cultivated mushroom and widely
used for nutritional, medicinal, and industrial applications. Yet, the mushroom's genetic …

Geographic isolation and environmental heterogeneity contribute to genetic differentiation in Cephalotaxus oliveri

H Liu, Z Wang, Y Zhang, M Li, T Wang… - Ecology and …, 2023 - Wiley Online Library
Evaluating the contributions of geographic distance and environmental heterogeneity to the
genetic divergence can inform the demographic history and responses to environmental …

Analysis of population structure and genetic diversity in an exotic germplasm collection of Eleusine coracana (L.) Gaertn. using genic-SSR markers

S Pandian, L Satish, R Rameshkumar… - Gene, 2018 - Elsevier
Finger millet (Eleusine coracana (L.) Geartn.) is one of the important small millets serves as
a food security crop because of its high nutritional values. The complex tetraploid genome of …

EST‐SSR‐based landscape genetics of Pseudotaxus chienii, a tertiary relict conifer endemic to China

S Li, Z Wang, Y Su, T Wang - Ecology and Evolution, 2021 - Wiley Online Library
Pseudotaxus chienii, belonging to the monotypic genus Pseudotaxus (Taxaceae), is a relict
conifer endemic to China. Its populations are usually small and patchily distributed, having a …

De novo transcriptomic analysis and development of EST-SSRs for Sorbus pohuashanensis (Hance) Hedl.

C Liu, Y Dou, X Guan, Q Fu, Z Zhang, Z Hu, J Zheng… - PLoS …, 2017 - journals.plos.org
Sorbus pohuashanensis is a native tree species of northern China that is used for a variety
of ecological purposes. The species is often grown as an ornamental landscape tree …

[HTML][HTML] Tracking the geographical origin of timber by DNA fingerprinting: a study of the endangered species Cinnamomum kanehirae in Taiwan

KH Hung, CH Lin, LP Ju - Holzforschung, 2017 - degruyter.com
Cinnamomum kanehirae Hay. is endemic in Taiwan and is severely threatened due to
intensive utilization and illegal logging. To combat illegal logging, suitable identification …

[HTML][HTML] Transcriptomic sequencing analysis, development, and validation of EST-SSR markers in reed canary grass

X Jia, Y Xiong, Y Xiong, X Ji, D Li, S Bai, L Yan… - Grass …, 2023 - maxapress.com
Reed canary grass (Phalaris arundinacea L.) is a promising high-yield cool-season forage
with significant ecological application potential in wastewater treatment and wetland …

Characterization and Application of EST-SSR Markers Developed From the Transcriptome of Amentotaxus argotaenia (Taxaceae), a Relict Vulnerable Conifer

X Ruan, Z Wang, T Wang, Y Su - Frontiers in Genetics, 2019 - frontiersin.org
Amentotaxus argotaenia (Taxaceae) is a vulnerable coniferous species with preference for
shade and moist environment. Accurate estimation of genetic variation is crucial for its …

RNA-Seq 技术在珍稀濒危植物研究中的应用进展

倪馨宇, 贺俊英, 燕孟娇, 杜超 - 植物研究, 2023 - integrativebiology.ac.cn
珍稀濒危植物是自然界当中的重要植物资源, 对研究植物系统进化, 生态环境恢复,
植物抗逆生理, 挖掘优异抗逆基因等方面具有重要意义, 但大部分珍稀濒危植物的遗传信息缺乏 …