Macromolecular crowding, phase separation, and homeostasis in the orchestration of bacterial cellular functions

B Monterroso, W Margolin, AJ Boersma, G Rivas… - Chemical …, 2024 - ACS Publications
Macromolecular crowding affects the activity of proteins and functional macromolecular
complexes in all cells, including bacteria. Crowding, together with physicochemical …

Minimal out-of-equilibrium metabolism for synthetic cells: a membrane perspective

E Bailoni, M Partipilo, J Coenradij… - ACS Synthetic …, 2023 - ACS Publications
Life-like systems need to maintain a basal metabolism, which includes importing a variety of
building blocks required for macromolecule synthesis, exporting dead-end products, and …

Local environment in biomolecular condensates modulates enzymatic activity across length scales

M Gil-Garcia, AI Benítez-Mateos, M Papp… - Nature …, 2024 - nature.com
The mechanisms that underlie the regulation of enzymatic reactions by biomolecular
condensates and how they scale with compartment size remain poorly understood. Here we …

Combinatorial optimization of gene expression through recombinase-mediated promoter and terminator shuffling in yeast

C Cautereels, J Smets, P Bircham… - Nature …, 2024 - nature.com
Microbes are increasingly employed as cell factories to produce biomolecules. This often
involves the expression of complex heterologous biosynthesis pathways in host strains …

Assembling membraneless organelles from de novo designed proteins

AT Hilditch, A Romanyuk, SJ Cross, R Obexer… - Nature Chemistry, 2024 - nature.com
Recent advances in de novo protein design have delivered a diversity of discrete de novo
protein structures and complexes. A new challenge for the field is to use these designs …

Photo‐Responsive Phase‐Separating Fluorescent Molecules for Intracellular Protein Delivery

Y Bao, H Chen, Z Xu, J Gao, L Jiang… - Angewandte Chemie, 2023 - Wiley Online Library
Cellular membranes, including the plasma and endosome membranes, are barriers to
outside proteins. Various vehicles have been devised to deliver proteins across the plasma …

[HTML][HTML] Selective induction of programmed cell death using synthetic biology tools

K Shkarina, P Broz - Seminars in cell & developmental biology, 2023 - Elsevier
Regulated cell death (RCD) controls the removal of dispensable, infected or malignant cells,
and is thus essential for development, homeostasis and immunity of multicellular organisms …

Designer protein compartments for microbial metabolic engineering

Z Fang, YJ Zhu, ZG Qian, XX Xia - Current Opinion in Biotechnology, 2024 - Elsevier
Highlights•Compartment formation driven by protein self-assembly or phase
transition.•Pathway enzymes can be directed into compartments for metabolic engineering.• …

Biomolecular condensates in kidney physiology and disease

G Gao, ES Sumrall, S Pitchiaya, M Bitzer… - Nature Reviews …, 2023 - nature.com
The regulation and preservation of distinct intracellular and extracellular solute
microenvironments is crucial for the maintenance of cellular homeostasis. In mammals, the …

SAFB restricts contact domain boundaries associated with L1 chimeric transcription

Y Hong, L Bie, T Zhang, X Yan, G Jin, Z Chen, Y Wang… - Molecular Cell, 2024 - cell.com
Summary Long interspersed element-1 (LINE-1 or L1) comprises 17% of the human
genome, continuously generates genetic variations, and causes disease in certain cases …