Chromatin arranges in chains of mesoscale domains with nanoscale functional topography independent of cohesin

E Miron, R Oldenkamp, JM Brown, DMS Pinto… - Science …, 2020 - science.org
Three-dimensional (3D) chromatin organization plays a key role in regulating mammalian
genome function; however, many of its physical features at the single-cell level remain …

3D RNA-scaffolded wireframe origami

MF Parsons, MF Allan, S Li, TR Shepherd… - Nature …, 2023 - nature.com
Hybrid RNA: DNA origami, in which a long RNA scaffold strand folds into a target
nanostructure via thermal annealing with complementary DNA oligos, has only been …

The long noncoding RNA CHROME regulates cholesterol homeostasis in primates

EJ Hennessy, C van Solingen, KR Scacalossi… - Nature …, 2019 - nature.com
The human genome encodes thousands of long noncoding RNAs (lncRNAs), the majority of
which are poorly conserved and uncharacterized. Here we identify a primate-specific …

Emerging role of non-coding RNA in oral cancer

F Momen-Heravi, S Bala - Cellular signalling, 2018 - Elsevier
Oral squamous cell carcinoma (OSCC) is characterized by genomic and epigenomic
alterations. However, the mechanisms underlying oral squamous cell carcinoma …

Roles of E-cadherin and Noncoding RNAs in the Epithelial–mesenchymal Transition and Progression in Gastric Cancer

IV Bure, MV Nemtsova, DV Zaletaev - International journal of molecular …, 2019 - mdpi.com
The epithelial–mesenchymal transition (EMT) is thought to be at the root of invasive and
metastatic cancer cell spreading. E-cadherin is an important player in this process, which …

An RNA-based theory of natural universal computation

H Akhlaghpour - Journal of Theoretical Biology, 2022 - Elsevier
Life is confronted with computation problems in a variety of domains including animal
behavior, single-cell behavior, and embryonic development. Yet we currently do not know of …

Biogenesis and function of circular RNAs in health and in disease

G Haddad, JM Lorenzen - Frontiers in pharmacology, 2019 - frontiersin.org
Circular RNAs (circRNAs) are a class of non-coding RNA that were previously thought to be
insignificant byproducts of splicing errors. However, recent advances in RNA sequencing …

Targeting RNA in mammalian systems with small molecules

A Donlic, AE Hargrove - Wiley Interdisciplinary Reviews: RNA, 2018 - Wiley Online Library
The recognition of RNA functions beyond canonical protein synthesis has challenged the
central dogma of molecular biology. Indeed, RNA is now known to directly regulate many …

Trithorax and Polycomb group-dependent regulation: a tale of opposing activities

SJ Geisler, R Paro - Development, 2015 - journals.biologists.com
Intricate layers of regulation determine the unique gene expression profiles of a given cell
and, therefore, underlie the immense phenotypic diversity observed among cell types …

The various regulatory functions of long noncoding RNAs in apoptosis, cell cycle, and cellular senescence

M Heydarnezhad Asl… - Journal of cellular …, 2022 - Wiley Online Library
Long noncoding RNAs (lncRNAs) are a group of noncoding cellular RNAs involved in
significant biological phenomena such as differentiation, cell development, genomic …