Four principles to establish a universal virus taxonomy

P Simmonds, EM Adriaenssens, FM Zerbini… - PLoS …, 2023 - journals.plos.org
A universal taxonomy of viruses is essential for a comprehensive view of the virus world and
for communicating the complicated evolutionary relationships among viruses. However …

RNA-targeting CRISPR–Cas systems

SPB van Beljouw, J Sanders… - Nature Reviews …, 2023 - nature.com
CRISPR–Cas is a widespread adaptive immune system in bacteria and archaea that
protects against viral infection by targeting specific invading nucleic acid sequences …

Cryptic and abundant marine viruses at the evolutionary origins of Earth's RNA virome

AA Zayed, JM Wainaina, G Dominguez-Huerta… - Science, 2022 - science.org
Whereas DNA viruses are known to be abundant, diverse, and commonly key ecosystem
players, RNA viruses are insufficiently studied outside disease settings. In this study, we …

RNA viromes from terrestrial sites across China expand environmental viral diversity

YM Chen, S Sadiq, JH Tian, X Chen, XD Lin… - Nature …, 2022 - nature.com
Environmental RNA viruses are ubiquitous and diverse, and probably have important
ecological and biogeochemical impacts. Understanding the global diversity of RNA viruses …

[HTML][HTML] Expansion of the global RNA virome reveals diverse clades of bacteriophages

U Neri, YI Wolf, S Roux, AP Camargo, B Lee… - Cell, 2022 - cell.com
High-throughput RNA sequencing offers broad opportunities to explore the Earth RNA
virome. Mining 5,150 diverse metatranscriptomes uncovered> 2.5 million RNA virus contigs …

Petabase-scale sequence alignment catalyses viral discovery

RC Edgar, B Taylor, V Lin, T Altman, P Barbera… - Nature, 2022 - nature.com
Public databases contain a planetary collection of nucleic acid sequences, but their
systematic exploration has been inhibited by a lack of efficient methods for searching this …

Diversity and ecological footprint of Global Ocean RNA viruses

G Dominguez-Huerta, AA Zayed, JM Wainaina, J Guo… - Science, 2022 - science.org
DNA viruses are increasingly recognized as influencing marine microbes and microbe-
mediated biogeochemical cycling. However, little is known about global marine RNA virus …

Diversity in the soil virosphere: to infinity and beyond?

S Roux, JB Emerson - Trends in Microbiology, 2022 - cell.com
Viruses are key members of Earth's microbiomes, shaping microbial community composition
and metabolism. Here, we describe recent advances in'soil viromics', that is, virus-focused …

Metavirome of 31 tick species provides a compendium of 1,801 RNA virus genomes

XB Ni, XM Cui, JY Liu, RZ Ye, YQ Wu, JF Jiang… - Nature …, 2023 - nature.com
The increasing prevalence and expanding distribution of tick-borne viruses globally have
raised health concerns, but the full repertoire of the tick virome has not been assessed. We …

The global virome: How much diversity and how many independent origins?

EV Koonin, M Krupovic, VV Dolja - Environmental Microbiology, 2023 - Wiley Online Library
Viruses are considered to be the most abundant biological entities on earth. They also
display striking genetic diversity as emphatically demonstrated by the recent advances of …