A network-based method using a random walk with restart algorithm and screening tests to identify novel genes associated with Menière's disease

L Li, YS Wang, L An, XY Kong, T Huang - PLoS One, 2017 - journals.plos.org
As a chronic illness derived from hair cells of the inner ear, Menière's disease (MD)
negatively influences the quality of life of individuals and leads to a number of symptoms …

A computational method using the random walk with restart algorithm for identifying novel epigenetic factors

JR Li, L Chen, SP Wang, YH Zhang, XY Kong… - Molecular genetics and …, 2018 - Springer
Epigenetic regulation has long been recognized as a significant factor in various biological
processes, such as development, transcriptional regulation, spermatogenesis, and …

[HTML][HTML] Network-based method for mining novel HPV infection related genes using random walk with restart algorithm

L Zhu, F Su, YC Xu, Q Zou - … et Biophysica Acta (BBA)-Molecular Basis of …, 2018 - Elsevier
The human papillomavirus (HPV), a common virus that infects the reproductive tract, may
lead to malignant changes within the infection area in certain cases and is directly …

[HTML][HTML] Identification of genes related to proliferative diabetic retinopathy through RWR algorithm based on protein–protein interaction network

J Zhang, Y Suo, M Liu, X Xu - … et Biophysica Acta (BBA)-Molecular Basis of …, 2018 - Elsevier
Proliferative diabetic retinopathy (PDR) is one of the most common complications of
diabetes and can lead to blindness. Proteomic studies have provided insight into the …

Determination of genes related to uveitis by utilization of the random walk with restart algorithm on a protein–protein interaction network

S Lu, Y Yan, Z Li, L Chen, J Yang, Y Zhang… - International Journal of …, 2017 - mdpi.com
Uveitis, defined as inflammation of the uveal tract, may cause blindness in both young and
middle-aged people. Approximately 10–15% of blindness in the West is caused by uveitis …

An integrated method for the identification of novel genes related to oral cancer

L Chen, J Yang, Z Xing, F Yuan, Y Shu, YH Zhang… - PLoS …, 2017 - journals.plos.org
Cancer is a significant public health problem worldwide. Complete identification of genes
related to one type of cancer facilitates earlier diagnosis and effective treatments. In this …

Identifying novel fruit-related genes in Arabidopsis thaliana based on the random walk with restart algorithm

Y Zhang, L Dai, Y Liu, YH Zhang, SP Wang - PLoS One, 2017 - journals.plos.org
Fruit is essential for plant reproduction and is responsible for protection and dispersal of
seeds. The development and maturation of fruit is tightly regulated by numerous genetic …

Immunohistochemical study of NR2C2, BTG2, TBX19, and CDK2 expression in 31 paired primary/recurrent nonfunctioning pituitary adenomas

X Yao, Y Zhang, L Wu, R Cheng, C Li… - International journal of …, 2019 - Wiley Online Library
This study investigated potential markers for predicting nonfunctioning pituitary adenoma
(NFPA) invasion and recurrence by high‐throughput tissue microarray analyses. We …

Identification of latent oncogenes with a network embedding method and random forest

R Zhao, B Hu, L Chen, B Zhou - BioMed research international, 2020 - Wiley Online Library
Oncogene is a special type of genes, which can promote the tumor initiation. Good study on
oncogenes is helpful for understanding the cause of cancers. Experimental techniques in …

Network-based method for identifying co-regeneration genes in bone, dentin, nerve and vessel tissues

L Chen, H Pan, YH Zhang, K Feng, XY Kong, T Huang… - Genes, 2017 - mdpi.com
Bone and dental diseases are serious public health problems. Most current clinical
treatments for these diseases can produce side effects. Regeneration is a promising therapy …