3′-end processing of eukaryotic mRNA: machinery, regulation, and impact on gene expression
V Boreikaitė, LA Passmore - Annual review of biochemistry, 2023 - annualreviews.org
Formation of the 3′ end of a eukaryotic mRNA is a key step in the production of a mature
transcript. This process is mediated by a number of protein factors that cleave the pre …
transcript. This process is mediated by a number of protein factors that cleave the pre …
Integrator recruits protein phosphatase 2A to prevent pause release and facilitate transcription termination
Efficient release of promoter-proximally paused RNA Pol II into productive elongation is
essential for gene expression. Recently, we reported that the Integrator complex can bind …
essential for gene expression. Recently, we reported that the Integrator complex can bind …
Transcriptional elongation control in developmental gene expression, aging, and disease
Y Aoi, A Shilatifard - Molecular cell, 2023 - cell.com
The elongation stage of transcription by RNA polymerase II (RNA Pol II) is central to the
regulation of gene expression in response to developmental and environmental cues in …
regulation of gene expression in response to developmental and environmental cues in …
Steps toward translocation-independent RNA polymerase inactivation by terminator ATPase ρ
N Said, T Hilal, ND Sunday, A Khatri, J Bürger, T Mielke… - Science, 2021 - science.org
INTRODUCTION Factor-dependent transcription termination is essential to limit pervasive
transcription, maintain genome stability, balance the expression of neighboring genes, and …
transcription, maintain genome stability, balance the expression of neighboring genes, and …
Integrator is a genome-wide attenuator of non-productive transcription
S Lykke-Andersen, K Žumer, EŠ Molska, JO Rouvière… - Molecular cell, 2021 - cell.com
Termination of RNA polymerase II (RNAPII) transcription in metazoans relies largely on the
cleavage and polyadenylation (CPA) and integrator (INT) complexes originally found to act …
cleavage and polyadenylation (CPA) and integrator (INT) complexes originally found to act …
Context-specific regulation and function of mRNA alternative polyadenylation
S Mitschka, C Mayr - Nature Reviews Molecular Cell Biology, 2022 - nature.com
Alternative cleavage and polyadenylation (APA) is a widespread mechanism to generate
mRNA isoforms with alternative 3′ untranslated regions (UTRs). The expression of …
mRNA isoforms with alternative 3′ untranslated regions (UTRs). The expression of …
SPT5 stabilizes RNA polymerase II, orchestrates transcription cycles, and maintains the enhancer landscape
Transcription progression is governed by multitasking regulators including SPT5, an
evolutionarily conserved factor implicated in virtually all transcriptional steps from enhancer …
evolutionarily conserved factor implicated in virtually all transcriptional steps from enhancer …
A unified allosteric/torpedo mechanism for transcriptional termination on human protein-coding genes
JD Eaton, L Francis, L Davidson… - Genes & …, 2020 - genesdev.cshlp.org
The allosteric and torpedo models have been used for 30 yr to explain how transcription
terminates on protein-coding genes. The former invokes termination via conformational …
terminates on protein-coding genes. The former invokes termination via conformational …
SPT5 stabilization of promoter-proximal RNA polymerase II
Y Aoi, YH Takahashi, AP Shah, M Iwanaszko… - Molecular cell, 2021 - cell.com
Based on in vitro studies, it has been demonstrated that the DSIF complex, composed of
SPT4 and SPT5, regulates the elongation stage of transcription catalyzed by RNA …
SPT4 and SPT5, regulates the elongation stage of transcription catalyzed by RNA …
A ubiquitous disordered protein interaction module orchestrates transcription elongation
K Cermakova, J Demeulemeester, V Lux, M Nedomova… - Science, 2021 - science.org
During eukaryotic transcription elongation, RNA polymerase II (RNAP2) is regulated by a
chorus of factors. Here, we identified a common binary interaction module consisting of TFIIS …
chorus of factors. Here, we identified a common binary interaction module consisting of TFIIS …