Diagnosis of invasive fungal infections: challenges and recent developments

W Fang, J Wu, M Cheng, X Zhu, M Du, C Chen… - Journal of biomedical …, 2023 - Springer
Background The global burden of invasive fungal infections (IFIs) has shown an upsurge in
recent years due to the higher load of immunocompromised patients suffering from various …

Inferring microbiota functions from taxonomic genes: a review

C Djemiel, PA Maron, S Terrat, S Dequiedt… - …, 2022 - academic.oup.com
Deciphering microbiota functions is crucial to predict ecosystem sustainability in response to
global change. High-throughput sequencing at the individual or community level has …

Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding?

R Lücking, MC Aime, B Robbertse, AN Miller… - IMA fungus, 2020 - Springer
True fungi (Fungi) and fungus-like organisms (eg Mycetozoa, Oomycota) constitute the
second largest group of organisms based on global richness estimates, with around 3 …

Temperature and pH define the realised niche space of arbuscular mycorrhizal fungi

J Davison, M Moora, M Semchenko… - New …, 2021 - Wiley Online Library
The arbuscular mycorrhizal (AM) fungi are a globally distributed group of soil organisms that
play critical roles in ecosystem function. However, the ecological niches of individual AM …

GlobalAMFungi: a global database of arbuscular mycorrhizal fungal occurrences from high‐throughput sequencing metabarcoding studies

T Větrovský, Z Kolaříková, C Lepinay… - New …, 2023 - Wiley Online Library
Arbuscular mycorrhizal (AM) fungi are crucial mutualistic symbionts of the majority of plant
species, with essential roles in plant nutrient uptake and stress mitigation. The importance of …

Global assessment of arbuscular mycorrhizal fungus diversity reveals very low endemism

J Davison, M Moora, M Öpik, A Adholeya, L Ainsaar… - Science, 2015 - science.org
The global biogeography of microorganisms remains largely unknown, in contrast to the well-
studied diversity patterns of macroorganisms. We used arbuscular mycorrhizal (AM) fungus …

Sequence-based classification and identification of Fungi

D Hibbett, K Abarenkov, U Kõljalg, M Öpik, B Chai… - Mycologia, 2016 - Taylor & Francis
Fungal taxonomy and ecology have been revolutionized by the application of molecular
methods and both have increasing connections to genomics and functional biology …

Species richness of arbuscular mycorrhizal fungi: associations with grassland plant richness and biomass

I Hiiesalu, M Pärtel, J Davison, P Gerhold… - New …, 2014 - Wiley Online Library
Although experiments show a positive association between vascular plant and arbuscular
mycorrhizal fungal (AMF) species richness, evidence from natural ecosystems is scarce …

[HTML][HTML] Soil textural heterogeneity impacts bacterial but not fungal diversity

FM Seaton, PBL George, I Lebron, DL Jones… - Soil Biology and …, 2020 - Elsevier
Soils harbour high levels of microbial diversity, underpinning their ability to provide key soil
functions and ecosystem services. The extreme variety of soil microbial life is often …

Community assembly and coexistence in communities of arbuscular mycorrhizal fungi

K Vályi, U Mardhiah, MC Rillig, S Hempel - The ISME journal, 2016 - academic.oup.com
Arbuscular mycorrhizal fungi are asexual, obligately symbiotic fungi with unique morphology
and genomic structure, which occupy a dual niche, that is, the soil and the host root …