[PDF][PDF] Protein-DNA recognition
RT Sauer, CO Pabo - Annu Rev Biochem, 1984 - nsm.buffalo.edu
Sequence-specific DNA-binding proteins regulate gene expression and also serve structural
and catalytic roles in other cellular processes. How do these proteins bind to double-helical …
and catalytic roles in other cellular processes. How do these proteins bind to double-helical …
Helix Geometry, Hydration, and G⋅ A Mismatch in a B-DNA Decamer
GG Privé, U Heinemann, S Chandrasegaran, LS Kan… - Science, 1987 - science.org
The DNA double helix is not a regular, featureless barberpole molecule. Different base
sequences have their own special signature, in the way that they influence groove width …
sequences have their own special signature, in the way that they influence groove width …
[图书][B] Principles of nucleic acid structure
W Saenger - 2013 - books.google.com
New textbooks at all levels of chemistry appear with great regularity. Some fields like basic
biochemistry, organic reaction mechanisms, and chemical ther modynamics are well …
biochemistry, organic reaction mechanisms, and chemical ther modynamics are well …
Structure of catabolite gene activator protein at 2.9 Å resolution suggests binding to left-handed B-DNA
DB McKay, TA Steitz - Nature, 1981 - nature.com
The 2.9 Å resolution crystal structure of Escherichia coli catabolite gene activator protein
(CAP) completed with cyclic AMP reveals two distinct structural domains separated by a …
(CAP) completed with cyclic AMP reveals two distinct structural domains separated by a …
Structure of a B-DNA dodecamer: II. Influence of base sequence on helix structure
RE Dickerson, HR Drew - Journal of molecular biology, 1981 - Elsevier
Detailed examination of the structure of the B-DNA dodecamer CGCGAATTCGCG, obtained
by single-crystal X-ray analysis (Drew et al., 1981), reveals that the local helix parameters …
by single-crystal X-ray analysis (Drew et al., 1981), reveals that the local helix parameters …
Reversible bending and helix geometry in a B-DNA dodecamer: CGCGAATTBrCGCG.
AV Fratini, ML Kopka, HR Drew… - Journal of Biological …, 1982 - ASBMB
A double-helical B-DNA dodecamer has been analyzed by single crystal x-ray diffraction
methods and refined independently in four variants: sequence CGCGAATTCGCG at 20 …
methods and refined independently in four variants: sequence CGCGAATTCGCG at 20 …
Conformation and dynamics of DNA and protein-DNA complexes by 31P NMR
DG Gorenstein - Chemical Reviews, 1994 - ACS Publications
31P NMR has developed as a powerful probe of the structure and dynamics of nucleicacids
and nucleic acid complexes in solution. Until recently 31P NMR studies of nucleic acids …
and nucleic acid complexes in solution. Until recently 31P NMR studies of nucleic acids …
Potential genetic functions of tandem repeated DNA sequence blocks in the human genome are based on a highly conserved “chromatin folding code”
P Vogt - Human genetics, 1990 - Springer
This review is based on a thorough description of the structure and sequence organization
of tandemly organized repetitive DNA sequence families in the human genome; it is aimed …
of tandemly organized repetitive DNA sequence families in the human genome; it is aimed …
Chiral probes for the handedness of DNA helices: enantiomers of tris (4, 7-diphenylphenanthroline) ruthenium (II).
JK Barton, LA Basile, A Danishefsky… - Proceedings of the …, 1984 - National Acad Sciences
The chiral complexes tris (4, 7-diphenyl-1, 10-phenanthroline) ruthenium (II)(RuDIP) are
shown to be specific chemical probes with which to distinguish right-and left-handed DNA …
shown to be specific chemical probes with which to distinguish right-and left-handed DNA …
Conformational and helicoidal analysis of 30 PS of molecular dynamics on the d (CGCGAATTCGCG) double helix:“curves”, dials and windows
G Ravishanker, S Swaminathan… - Journal of …, 1989 - Taylor & Francis
A new procedure for the analysis of the structure and molecular dynamics of duplex DNA is
introduced, in which comprehensive visualization of results and pattern recognition is greatly …
introduced, in which comprehensive visualization of results and pattern recognition is greatly …