Complete Chloroplast Genome Sequence of a New Variety of Brasenia schreberi: Genome Characteristics, Comparative Analysis, and Phylogenetic Relationships

Y Sun, M Li, J Ma, M He, Y Zheng - Agronomy, 2022 - mdpi.com
This study sequenced and assembled the chloroplast (cp) genome of Brasenia schreberi
cv.'Mahu Chuncai', a novel variety of B. schreberi rich in nutrients with distinctive …

Study of codon usage patterns and influencing factors in rice yellow mottle virus based on coding sequence data

SU Rahman, S Nawaz, S Ullah, IU Rahman, MIU Haq… - Agronomy, 2022 - mdpi.com
Rice yellow mottle virus (RYMV), transmitted by chrysomelids, is one of the major viral
pathogens that has devastated rice production in Sub-Saharan Africa. RYMV is a member of …

Bioinformatic Analysis of Codon Usage Bias of HSP20 Genes in Four Cruciferous Species

H Ji, J Liu, Y Chen, X Yu, C Luo, L Sang, J Zhou… - Plants, 2024 - mdpi.com
Heat shock protein 20 (HSP20) serves as a chaperone and plays roles in numerous
biological processes, but the codon usage bias (CUB) of its genes has remained …

Comparative genome wise analysis of codon usage of Staphylococcus Genus

P Arora, CS Mukhopadhyay, S Kaur - Current Genetics, 2024 - Springer
The genus Staphylococcus encompasses a diverse array of bacteria with significant
implications for human health, including disreputable pathogens such as Staphylococcus …

smAMPsTK: a toolkit to unravel the smORFome encoding AMPs of plant species

M Jaiswal, S Kumar - Journal of Biomolecular Structure and …, 2023 - Taylor & Francis
The pervasive repertoire of plant molecules with the potential to serve as a substitute for
conventional antibiotics has led to obtaining better insights into plant-derived antimicrobial …

Plastid Phylogenetics, Biogeography, and Character Evolution of the Chinese Endemic Genus Sinojackia Hu

X Jian, Y Wang, Q Li, Y Miao - Diversity, 2024 - mdpi.com
Sinojackia Hu. comprises five to eight Chinese endemic species with high ornamental and
medicinal value. However, the generic limits, interspecific relationships and evolutionary …

In silico analysis of NAC gene family in the mangrove plant Avicennia marina provides clues for adaptation to intertidal habitats

S Song, D Ma, C Xu, Z Guo, J Li, L Song, M Wei… - Plant Molecular …, 2023 - Springer
Abstract NAC (NAM, ATAF1/2, CUC2) transcription factors (TFs) constitute a plant-specific
gene family. It is reported that NAC TFs play important roles in plant growth and …

Comparative analysis of tRNA genes in the mitochondrial genome of Parasitidae (Parasitiformes: Mesostigmata)

H Yang, Z Yang, T Chen, W Dong - International Journal of …, 2022 - Taylor & Francis
The mitochondrial genome of Parasitus fimetorum was sequenced to study the Parasitidae
tRNA gene secondary structure in Parasitiformes. tRNAscan-SE and ARWEN identified and …

乌苏里貉MC3R 基因密码子偏好性分析

李鑫, 李伟, 刘洁, 程静然, 刘进军, 王朋然, 韩学良… - 中国畜牧兽医, 2024 - chvm.net
[目的] 明确乌苏里貉黑素皮质素受体3 (melanocortin3receptor, MC3R) 基因密码子使用偏好
特征和影响因素, 了解不同物种间遗传进化和密码子偏好性的关系, 为开展MC3R …

秦巴山区三种人参属药用植物叶绿体基因组特征分析.

彭毅丹, 马楠, 叶奕含, 刘亦欣, 谭启怡, 陈莹… - …, 2024 - search.ebscohost.com
为明确珠子参, 羽叶三七和秀丽假人参3 种药用植物叶绿体基因组特征与系统发育关系ꎬ
该文以秦巴山区3 种人参属药用植物为研究对象ꎬ 运用生物信息学技术ꎬ 分析其叶绿体基因组 …