Network biology, an interdisciplinary field at the intersection of computational and biological
sciences, is critical for deepening understanding of cellular functioning and disease. While …

Because petroleum-based plastics are not biodegradable, as well as the energy they
require in their production, the rising plastic substantially contributes to the depletion of the …

Signaling and metabolic pathways, which consist of chains of reactions that produce target
molecules from source compounds, are cornerstones of cellular biology. Properly modeling …

Motivation A factory in a metabolic network specifies how to produce target molecules from
source compounds through biochemical reactions, properly accounting for reaction …

Signaling and metabolic pathways, which consist of a series of reactions producing target
molecules from source compounds, are cornerstones of cellular biology. The cellular …

Proteins are biological molecules that carry out a multitude of cellular functions. Their
function is largely determined by the shape of the folded molecule within the cell—called …

Perhaps the most fundamental model in synthetic and systems biology for inferring
pathways in metabolic reaction networks is a metabolic factory: a system of reactions that …