Incongruence in the phylogenomics era

JL Steenwyk, Y Li, X Zhou, XX Shen… - Nature Reviews Genetics, 2023 - nature.com
Genome-scale data and the development of novel statistical phylogenetic approaches have
greatly aided the reconstruction of a broad sketch of the tree of life and resolved many of its …

Prevalence and adaptive impact of introgression

NB Edelman, J Mallet - Annual Review of Genetics, 2021 - annualreviews.org
Alleles that introgress between species can influence the evolutionary and ecological fate of
species exposed to novel environments. Hybrid offspring of different species are often unfit …

Phylogenomic approaches to detecting and characterizing introgression

MS Hibbins, MW Hahn - Genetics, 2022 - academic.oup.com
Phylogenomics has revealed the remarkable frequency with which introgression occurs
across the tree of life. These discoveries have been enabled by the rapid growth of methods …

Highly contiguous assemblies of 101 drosophilid genomes

BY Kim, JR Wang, DE Miller, O Barmina, E Delaney… - Elife, 2021 - elifesciences.org
Over 100 years of studies in Drosophila melanogaster and related species in the genus
Drosophila have facilitated key discoveries in genetics, genomics, and evolution. While high …

The origin of a land flora

JL Bowman - Nature Plants, 2022 - nature.com
The origin of a land flora fundamentally shifted the course of evolution of life on earth,
facilitating terrestrialization of other eukaryotic lineages and altering the planet's geology …

Phylotranscriptomics unveil a Paleoproterozoic-Mesoproterozoic origin and deep relationships of the Viridiplantae

Z Yang, X Ma, Q Wang, X Tian, J Sun, Z Zhang… - Nature …, 2023 - nature.com
The Viridiplantae comprise two main clades, the Chlorophyta (including a diverse array of
marine and freshwater green algae) and the Streptophyta (consisting of the freshwater …

Ecology-relevant bacteria drive the evolution of host antimicrobial peptides in Drosophila

MA Hanson, L Grollmus, B Lemaitre - Science, 2023 - science.org
Antimicrobial peptides are host-encoded immune effectors that combat pathogens and
shape the microbiome in plants and animals. However, little is known about how the host …

A genetic basis for facultative parthenogenesis in Drosophila

AL Sperling, DK Fabian, E Garrison, DM Glover - Current Biology, 2023 - cell.com
Facultative parthenogenesis enables sexually reproducing organisms to switch between
sexual and asexual parthenogenetic reproduction. To gain insights into this phenomenon …

Evolutionary genomics of oceanic island radiations

J Cerca, DD Cotoras, VC Bieker, R De-Kayne… - Trends in ecology & …, 2023 - cell.com
A recurring feature of oceanic archipelagos is the presence of adaptive radiations that
generate endemic, species-rich clades that can offer outstanding insight into the links …

Standardized nuclear markers improve and homogenize species delimitation in Metazoa

L Dietz, J Eberle, C Mayer, S Kukowka… - Methods in Ecology …, 2023 - Wiley Online Library
Species are the fundamental units of life and evolution. Their recognition is essential for
science and society. Molecular methods have been increasingly used for the identification of …