Make-or-break prime editing for bacterial genome engineering

M Rengifo-Gonzalez, MV Mazzuoli, AB Janssen… - bioRxiv, 2024 - biorxiv.org
CRISPR-Cas9 has revolutionized genome engineering by allowing precise introductions of
DNA double-strand breaks (DSBs). However, genome engineering in bacteria is still a …

Analysing the Cyanobacterial PipX Interaction Network Using NanoBiT Complementation in Synechococcus elongatus PCC7942

C Jerez García, A Llop Estevez, P Salinas, S Bibak… - 2024 - rua.ua.es
The conserved cyanobacterial protein PipX is part of a complex interaction network with
regulators involved in essential processes that include metabolic homeostasis and ribosome …

Proteolytic activity of surface exposed HtrA determines its expression level and is needed to survive acidic conditions in Clostridioides difficile

J Corver, B Claushuis, TM Shamorkina, AH de Ru… - bioRxiv, 2024 - biorxiv.org
To survive in the host, pathogenic bacteria need to be able to react to the unfavourable
conditions that they encounter, like low pH, elevated temperatures, antimicrobial peptides …

Identification of the Unwinding Region in the Clostridioides difficile Chromosomal Origin of Replication

AM Oliveira Paiva, E Van Eijk, AH Friggen… - Frontiers in …, 2020 - frontiersin.org
Faithful DNA replication is crucial for viability of cells across all kingdoms. Targeting DNA
replication is a viable strategy for inhibition of bacterial pathogens. Clostridioides difficile is …

Spatio-temporal control of DNA replication by the pneumococcal cell cycle regulator CcrZ

C Gallay, S Sanselicio, ME Anderson, YM Soh, X Liu… - bioRxiv, 2019 - biorxiv.org
Most bacteria replicate and segregate their DNA concomitantly while growing, before cell
division takes place. How bacteria synchronize these different cell cycle events to ensure …

The dissection of Β-lactam resistance in Bacillus anthracis, Bacillus cereus, and Bacillus thuringiensis

KM Nauta - 2021 - search.proquest.com
Antibiotic resistance is transcriptionally controlled and activated in response to antibiotics.
Extracytoplasmic function σ factors are specialized transcription factors that are activated in …

[PDF][PDF] A plasmon ruler to probe conformational transitions of single molecules in real-time

M Horácek - 2020 - research.tue.nl
Biopolymers such as proteins and nucleic acids participate in many biological mechanisms
such as catalysis, gene expression or DNA recombination. To execute their function …

[PDF][PDF] Characterisation of Clostridium saccharoperbutylacetonicum for biotechnological applications

L de Lussy-Kubisa - 2022 - etheses.whiterose.ac.uk
Clostridium saccharoperbutylacetonicum is an anaerobe that is growing in importance for
biotechnological applications. In recent years, significant strides have been made in …

The Early Stages of Clostridioides difficile Spore Germination

M Baloh - 2022 - search.proquest.com
Clostridioides difficile is a Gram-positive, obligately anaerobic microorganism that is of
considerable medical concern as a nosocomial and community-acquired human pathogen …

Practical observations on the use of fluorescent reporter systems in C. difficile

AM Oliveira Paiva, AH Friggen, R Douwes, B Wittekoek… - bioRxiv, 2021 - biorxiv.org
Objectives Fluorescence microscopy is a valuable tool to study a broad variety of bacterial
cell components and dynamics thereof. For Clostridioides difficile, the fluorescent proteins …