[HTML][HTML] High-content CRISPR screening

C Bock, P Datlinger, F Chardon, MA Coelho… - Nature Reviews …, 2022 - nature.com
CRISPR screens are a powerful source of biological discovery, enabling the unbiased
interrogation of gene function in a wide range of applications and species. In pooled …

Directed evolution: methodologies and applications

Y Wang, P Xue, M Cao, T Yu, ST Lane… - Chemical reviews, 2021 - ACS Publications
Directed evolution aims to expedite the natural evolution process of biological molecules
and systems in a test tube through iterative rounds of gene diversifications and library …

Soil microbiome engineering for sustainability in a changing environment

JK Jansson, R McClure, RG Egbert - Nature Biotechnology, 2023 - nature.com
Recent advances in microbial ecology and synthetic biology have the potential to mitigate
damage caused by anthropogenic activities that are deleteriously impacting Earth's soil …

[HTML][HTML] Microbiome engineering: synthetic biology of plant-associated microbiomes in sustainable agriculture

J Ke, B Wang, Y Yoshikuni - Trends in Biotechnology, 2021 - cell.com
To support an ever-increasing population, modern agriculture faces numerous challenges
that pose major threats to global food and energy security. Plant-associated microbes, with …

Targeted, random mutagenesis of plant genes with dual cytosine and adenine base editors

C Li, R Zhang, X Meng, S Chen, Y Zong, C Lu… - Nature …, 2020 - nature.com
Targeted saturation mutagenesis of crop genes could be applied to produce genetic variants
with improved agronomic performance. However, tools for directed evolution of plant genes …

[HTML][HTML] Machine learning for metabolic engineering: A review

CE Lawson, JM Martí, T Radivojevic… - Metabolic …, 2021 - Elsevier
Abstract Machine learning provides researchers a unique opportunity to make metabolic
engineering more predictable. In this review, we offer an introduction to this discipline in …

Recent advances in metabolic engineering of Saccharomyces cerevisiae: new tools and their applications

J Lian, S Mishra, H Zhao - Metabolic engineering, 2018 - Elsevier
Metabolic engineering aims to develop efficient cell factories by rewiring cellular
metabolism. As one of the most commonly used cell factories, Saccharomyces cerevisiae …

Systems metabolic engineering strategies: integrating systems and synthetic biology with metabolic engineering

KR Choi, WD Jang, D Yang, JS Cho, D Park… - Trends in …, 2019 - cell.com
Metabolic engineering allows development of microbial strains efficiently producing
chemicals and materials, but it requires much time, effort, and cost to make the strains …

[HTML][HTML] Methods and applications of CRISPR-mediated base editing in eukaryotic genomes

GT Hess, J Tycko, D Yao, MC Bassik - Molecular cell, 2017 - cell.com
The past several years have seen an explosion in development of applications for the
CRISPR-Cas9 system, from efficient genome editing, to high-throughput screening, to …

Engineering wired life: synthetic biology for electroactive bacteria

LJ Bird, BB Kundu, T Tschirhart, AD Corts… - ACS Synthetic …, 2021 - ACS Publications
Electroactive bacteria produce or consume electrical current by moving electrons to and
from extracellular acceptors and donors. This specialized process, known as extracellular …