Homoeologous exchanges, segmental allopolyploidy, and polyploid genome evolution

AS Mason, JF Wendel - Frontiers in Genetics, 2020 - frontiersin.org
Polyploidy is a major force in plant evolution and speciation. In newly formed allopolyploids,
pairing between related chromosomes from different subgenomes (homoeologous …

Doubling down on genomes: polyploidy and crop plants

S Renny‐Byfield, JF Wendel - American journal of botany, 2014 - Wiley Online Library
Polyploidy, or whole genome multiplication, is ubiquitous among angiosperms. Many crop
species are relatively recent allopolyploids, resulting from interspecific hybridization and …

Homoeologous exchange is a major cause of gene presence/absence variation in the amphidiploid Brassica napus

B Hurgobin, AA Golicz, PE Bayer… - Plant biotechnology …, 2018 - Wiley Online Library
Homoeologous exchanges (HE s) have been shown to generate novel gene combinations
and phenotypes in a range of polyploid species. Gene presence/absence variation (PAV) is …

The high‐quality genome of Brassica napus cultivar 'ZS11' reveals the introgression history in semi‐winter morphotype

F Sun, G Fan, Q Hu, Y Zhou, M Guan, C Tong… - The Plant …, 2017 - Wiley Online Library
Allotetraploid oilseed rape (Brassica napus L.) is an agriculturally important crop. Cultivation
and breeding of B. napus by humans has resulted in numerous genetically diverse …

Extensive chromosomal variation in a recently formed natural allopolyploid species, Tragopogon miscellus (Asteraceae)

M Chester, JP Gallagher… - Proceedings of the …, 2012 - National Acad Sciences
Polyploidy, or whole genome duplication, has played a major role in the evolution of many
eukaryotic lineages. Although the prevalence of polyploidy in plants is well documented, the …

Patterns, mechanisms, and consequences of homoeologous exchange in allopolyploid angiosperms: a genomic and epigenomic perspective

SK Deb, PP Edger, JC Pires, MR McKain - New Phytologist, 2023 - Wiley Online Library
Allopolyploids result from hybridization between different evolutionary lineages coupled with
genome doubling. Homoeologous chromosomes (chromosomes with common shared …

Gradual evolution of allopolyploidy in Arabidopsis suecica

R Burns, T Mandáková, J Gunis… - Nature Ecology & …, 2021 - nature.com
Most diploid organisms have polyploid ancestors. The evolutionary process of
polyploidization is poorly understood but has frequently been conjectured to involve some …

Homoeolog expression bias and expression level dominance in allopolyploids

CE Grover, JP Gallagher, EP Szadkowski, MJ Yoo… - New Phytologist, 2012 - JSTOR
Polyploidy is now recognized as a characteristic feature of all angiosperm genomes (Jiao et
al., 2011), and remains an important speciation process today (Wendel, 2000; Comai, 2005; …

Accessing complex crop genomes with next-generation sequencing

D Edwards, J Batley, RJ Snowdon - Theoretical and Applied Genetics, 2013 - Springer
Many important crop species have genomes originating from ancestral or recent
polyploidisation events. Multiple homoeologous gene copies, chromosomal rearrangements …

Homoeologous recombination in allopolyploids: the polyploid ratchet

RT Gaeta, J Chris Pires - New Phytologist, 2010 - Wiley Online Library
Polyploidization and recombination are two important processes driving evolution through
the building and reshaping of genomes. Allopolyploids arise from hybridization and …