scRNA-seq: oh, the joys
V Marx - Nature Methods, 2024 - nature.com
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Dissection and integration of bursty transcriptional dynamics for complex systems
CF Gao, S Vaikuntanathan… - Proceedings of the …, 2024 - National Acad Sciences
RNA velocity estimation is a potentially powerful tool to reveal the directionality of
transcriptional changes in single-cell RNA-sequencing data, but it lacks accuracy, absent …
transcriptional changes in single-cell RNA-sequencing data, but it lacks accuracy, absent …
[HTML][HTML] Clinical implications of single cell sequencing for bladder cancer
R Yadollahvandmiandoab, M Jalalizadeh… - Oncology …, 2024 - ncbi.nlm.nih.gov
Bladder cancer (BC) is the 10th most common cancer worldwide, with about 0.5 million
reported new cases and about 0.2 million deaths per year. In this scoping review, we …
reported new cases and about 0.2 million deaths per year. In this scoping review, we …
Drug targeting in psychiatric disorders—how to overcome the loss in translation?
K Khodosevich, K Dragicevic, O Howes - Nature Reviews Drug …, 2024 - nature.com
In spite of major efforts and investment in development of psychiatric drugs, many clinical
trials have failed in recent decades, and clinicians still prescribe drugs that were discovered …
trials have failed in recent decades, and clinicians still prescribe drugs that were discovered …
Tutorial on survival modeling with applications to omics data
Motivation Identification of genomic, molecular and clinical markers prognostic of patient
survival is important for developing personalized disease prevention, diagnostic and …
survival is important for developing personalized disease prevention, diagnostic and …
Single Cell Transcriptomics to Understand HSC Heterogeneity and Its Evolution upon Aging
L Hérault, M Poplineau, E Remy, E Duprez - Cells, 2022 - mdpi.com
Single-cell transcriptomic technologies enable the uncovering and characterization of
cellular heterogeneity and pave the way for studies aiming at understanding the origin and …
cellular heterogeneity and pave the way for studies aiming at understanding the origin and …
Marine invertebrates one cell at a time: insights from single-cell analysis
P Bump, L Lubeck - Integrative and Comparative Biology, 2023 - academic.oup.com
Over the past decade, single-cell RNA-sequencing (scRNA-seq) has made it possible to
study the cellular diversity of a broad range of organisms. Technological advances in single …
study the cellular diversity of a broad range of organisms. Technological advances in single …
MOI is a comprehensive database collecting processed multi-omics data associated with viral infection
X Guo, Y Zhao, F You - Scientific Reports, 2024 - nature.com
Viral infections pose significant public health challenges, exemplified by the global impact of
COVID-19 caused by SARS-CoV-2. Understanding the intricate molecular mechanisms …
COVID-19 caused by SARS-CoV-2. Understanding the intricate molecular mechanisms …
The relationship between SARS-CoV-2 infection and type 1 diabetes mellitus
C Debuysschere, MP Nekoua, EK Alidjinou… - Nature Reviews …, 2024 - nature.com
Environmental factors, in particular viral infections, are thought to have an important role in
the pathogenesis of type 1 diabetes mellitus (T1DM). The COVID-19 pandemic reinforced …
the pathogenesis of type 1 diabetes mellitus (T1DM). The COVID-19 pandemic reinforced …
scLENS: data-driven signal detection for unbiased scRNA-seq data analysis
High dimensionality and noise have limited the new biological insights that can be
discovered in scRNA-seq data. While dimensionality reduction tools have been developed …
discovered in scRNA-seq data. While dimensionality reduction tools have been developed …