Identification and validation of novel small proteins in Pseudomonas putida

X Yang, SI Jensen, T Wulff… - Environmental …, 2016 - Wiley Online Library
Small proteins of 50 amino acids or less have been understudied due to difficulties that
impede their annotation and detection. In order to obtain information on small open reading …

Understanding the host-adapted state of Citrobacter rodentium by transcriptomic analysis

AD Smith, X Yan, C Chen, HD Dawson… - Archives of …, 2016 - Springer
Citrobacter rodentium (Cr) is a mouse pathogen that mimics many aspects of
enteropathogenic Escherichia coli infections including producing attaching and effacing …

Role of Multispecies Biofilms with a Dominance of Bacillus subtilis in the Rhizosphere

I Ganchev - Biology Bulletin, 2021 - Springer
Bacillus subtilis is a soil-dwelling, spore-forming bacterium that is also a plant growth-
promoting rhizobacterium (PGPR) and an excellent biological control agent with various …

Integration Host Factor IHF facilitates homologous recombination and mutagenic processes in Pseudomonas putida

K Mikkel, M Tagel, K Ukkivi, H Ilves, M Kivisaar - DNA repair, 2020 - Elsevier
Nucleoid-associated proteins (NAPs) such as IHF, HU, Fis, and H-NS alter the topology of
bound DNA and may thereby affect accessibility of DNA to repair and recombination …

Biofilm formation on plant surfaces by rhizobacteria: impact on plant growth and ecological significance.

MM Altaf, I Ahmad - The handbook of microbial bioresources, 2016 - cabidigitallibrary.org
Microorganisms have historically been studied as planktonic or free-swimming cells, but
most exist as sessile communities attached to surfaces, in multicellular assemblies known as …

Pseudomonas putida Fis Binds to the lapF Promoter In Vitro and Represses the Expression of LapF

A Lahesaare, H Moor, M Kivisaar, R Teras - PLoS One, 2014 - journals.plos.org
The biofilm matrix of the rhizospheric bacterium Pseudomonas putida consists mainly of a
proteinaceous component. The two largest P. putida proteins, adhesins LapA and LapF, are …

Pseudouridines of tRNA Anticodon Stem-Loop Have Unexpected Role in Mutagenesis in Pseudomonas sp.

M Tagel, H Ilves, M Leppik, K Jürgenstein, J Remme… - Microorganisms, 2020 - mdpi.com
Pseudouridines are known to be important for optimal translation. In this study we
demonstrate an unexpected link between pseudouridylation of tRNA and mutation …

Colonization efficiency of Pseudomonas putida is influenced by Fis-controlled transcription of nuoA-N operon

A Teppo, A Lahesaare, H Ainelo, K Samuel, M Kivisaar… - Plos one, 2018 - journals.plos.org
Root colonization of plant growth-promoting bacteria is a complex multistep process that is
influenced by several factors. For example, during adherence to plant roots, bacteria have to …

Genomic Factors Associated With Pseudomonas Virulence and Antagonism

T Muruvanda - 2023 - search.proquest.com
The longstanding problem with culture-dependent methods has been a reliance on pre-
enrichment/enrichment steps which often comprise within them background microbial flora …

Quorum sensing in plant microbe interaction

MP Raghavendra - … Important Microbes for Sustainable Agriculture: Volume …, 2017 - Springer
The coordinated behaviors, at the population level, occur in bacteria due to communication
between the cells, which is defined as quorum sensing (QS). These communications help …