[HTML][HTML] Noise suppression in stochastic genetic circuits using pid controllers
Inside individual cells, protein population counts are subject to molecular noise due to low
copy numbers and the inherent probabilistic nature of biochemical processes. We …
copy numbers and the inherent probabilistic nature of biochemical processes. We …
Silent transcription intervals and translational bursting lead to diverse phenotypic switching
X Yang, S Luo, Z Zhang, Z Wang, T Zhou… - Physical Chemistry …, 2022 - pubs.rsc.org
Gene-expression bimodality, as a potential mechanism generating phenotypic cell diversity,
can enhance the survival of cells in a fluctuating environment. Previous studies have shown …
can enhance the survival of cells in a fluctuating environment. Previous studies have shown …
Comparing feedback strategies for minimizing noise in gene expression event timing
Many cellular events occur when their corresponding regulatory proteins attain critical
thresholds. Can cells schedule such events with precision by controlling the dynamics of the …
thresholds. Can cells schedule such events with precision by controlling the dynamics of the …
Optimizing precision in cellular clocks through self-regulated accumulation of molecules
The timing of cellular events is often determined by the instant when the level of a chemical
species crosses a threshold from an initial value of zero. To attenuate the inherent random …
species crosses a threshold from an initial value of zero. To attenuate the inherent random …
Mixed-feedback architectures for precise event timing through stochastic accumulation of biomolecules
The timing of biochemical events is often determined by the accumulation of a protein or
chemical species to a critical threshold level. In a stochastic model, we define event timing …
chemical species to a critical threshold level. In a stochastic model, we define event timing …
Feedback strategies for threshold crossing of protein levels at a prescribed time
The timing of diverse cellular processes is based on the instant when the concentration of
regulatory proteins crosses a critical threshold level. Hence, noise mechanisms inherent to …
regulatory proteins crosses a critical threshold level. Hence, noise mechanisms inherent to …
Regulatory strategies to schedule threshold crossing of protein levels at a prescribed time
The timing of diverse cellular processes is based on the instant when the concentration of
regulatory proteins crosses a critical threshold level. Hence, noise mechanisms inherent to …
regulatory proteins crosses a critical threshold level. Hence, noise mechanisms inherent to …
Controlling event timing precision for gene expression with external disturbances
KR Ghusinga, A Singh - 2020 59th IEEE Conference on …, 2020 - ieeexplore.ieee.org
Gene expression is inherently a stochastic process, leading to randomness in the timing of
events. A problem of interest is to understand how cells achieve temporal precision …
events. A problem of interest is to understand how cells achieve temporal precision …
[PDF][PDF] Precision of Biomolecular Timekeeping Through Regulated Degradation
The timing of biochemical processes within cells is inextricably linked to the level of key
regulatory proteins crossing critical threshold levels. Recent research has primarily focused …
regulatory proteins crossing critical threshold levels. Recent research has primarily focused …
Regulating gene expression to achieve temporal precision
KR Ghusinga, A Singh - IFAC-PapersOnLine, 2021 - Elsevier
Cellular response to a stimulus is often triggered by accumulation of an appropriate gene
product up to a critical threshold. How cells regulate gene expression to achieve precision in …
product up to a critical threshold. How cells regulate gene expression to achieve precision in …