p38-mediated FOXN3 phosphorylation modulates lung inflammation and injury through the NF-κB signaling pathway

X Zhu, B Huang, F Zhao, J Lian, L He… - Nucleic Acids …, 2023 - academic.oup.com
NF-κB activates the primary inflammatory response pathway responsible for methicillin-
resistant Staphylococcus aureus (MRSA)-induced lung inflammation and injury. Here, we …

[HTML][HTML] Strategies used for genetically modifying bacterial genome: site-directed mutagenesis, gene inactivation, and gene over-expression

J Xu, W Zhang - Journal of Zhejiang University-SCIENCE B, 2016 - Springer
With the availability of the whole genome sequence of Escherichia coli or Corynebacterium
glutamicum, strategies for directed DNA manipulation have developed rapidly. DNA …

[HTML][HTML] Histone cross-talk connects protein phosphatase 1α (PP1α) and histone deacetylase (HDAC) pathways to regulate the functional transition of bromodomain …

X Hu, X Lu, R Liu, N Ai, Z Cao, Y Li, J Liu, B Yu… - Journal of Biological …, 2014 - ASBMB
Transcription elongation has been recognized as a rate-limiting step for the expression of
signal-inducible genes. Through recruitment of positive transcription elongation factor P …

Effect of mutations in capsid shell protein on the assembly of BmCPV virus-like particles

F Ren, L Swevers, Q Lu, Y Zhao… - Journal of General …, 2021 - microbiologyresearch.org
Bombyx mori cytoplasmic polyhedrosis virus (BmCPV) is a typical single-layer capsid
dsRNA virus belonging to the genus Cypovirus in the family Reoviridae. The results of cryo …

[HTML][HTML] One-tube-only standardized site-directed mutagenesis: an alternative approach to generate amino acid substitution collections

J Mingo, A Erramuzpe, S Luna, O Aurtenetxe, L Amo… - PloS one, 2016 - journals.plos.org
Site-directed mutagenesis (SDM) is a powerful tool to create defined collections of protein
variants for experimental and clinical purposes, but effectiveness is compromised when a …

A rapid and efficient one-step site-directed deletion, insertion, and substitution mutagenesis protocol

D Wu, X Guo, J Lu, X Sun, F Li, Y Chen, D Xiao - Analytical biochemistry, 2013 - Elsevier
A rapid and efficient site-directed mutagenesis (SDM) protocol based on two separate
polymerase chain reaction (PCR) amplifications and homologous recombination in …

A python script to design site‐directed mutagenesis primers

C Bi, X Huang, D Tang, Y Shi, L Zhou, Y Hu… - Protein …, 2020 - Wiley Online Library
Primer design is essential to conduct whole plasmid site‐directed mutagenesis for protein
study. Traditionally, primers of mutagenesis are designed manually that is time‐consuming …

An efficient method for multiple site-directed mutagenesis using type IIs restriction enzymes

Z Zhang, K Xu, Y Xin, Z Zhang - Analytical biochemistry, 2015 - Elsevier
Site-directed mutagenesis (SDM) methods are very important in modern molecular biology,
biochemistry, and protein engineering. Here, we present a novel SDM method that can be …

[HTML][HTML] A mutant screening method by critical annealing temperature-PCR for site-directed mutagenesis

Y Liu, T Wu, J Song, X Chen, Y Zhang, Y Wan - BMC biotechnology, 2013 - Springer
Background Distinguishing desired mutants from parental templates and undesired mutants
is a problem not well solved in Quikchange™ mutagenesis. Although Dpn I digestion can …

Fission yeast nucleolar protein Dnt1 regulates G2/M transition and cytokinesis by downregulating Wee1 kinase

Z Yu, M Zhang, G Wang, D Xu… - Journal of cell …, 2013 - journals.biologists.com
Cytokinesis involves temporally and spatially coordinated action of the cell cycle,
cytoskeletal and membrane systems to achieve separation of daughter cells. The septation …