Gut microbial metabolites as multi-kingdom intermediates
KA Krautkramer, J Fan, F Bäckhed - Nature Reviews Microbiology, 2021 - nature.com
The gut microbiota contributes to host physiology through the production of a myriad of
metabolites. These metabolites exert their effects within the host as signalling molecules and …
metabolites. These metabolites exert their effects within the host as signalling molecules and …
Best practices in metabarcoding of fungi: from experimental design to results
The development of high‐throughput sequencing (HTS) technologies has greatly improved
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …
Perspectives and benefits of high-throughput long-read sequencing in microbial ecology
Short-read, high-throughput sequencing (HTS) methods have yielded numerous important
insights into microbial ecology and function. Yet, in many instances short-read HTS …
insights into microbial ecology and function. Yet, in many instances short-read HTS …
Synthetic ecology of the human gut microbiota
G Vrancken, AC Gregory, GRB Huys, K Faust… - Nature Reviews …, 2019 - nature.com
Despite recent advances in sequencing and culturing, a deep knowledge of the wiring and
functioning of the human gut ecosystem and its microbiota as a community is still missing. A …
functioning of the human gut ecosystem and its microbiota as a community is still missing. A …
Inter-species metabolic interactions in an in-vitro minimal human gut microbiome of core bacteria
Abstract Knowledge of the functional roles and interspecies interactions are crucial for
improving our understanding of the human intestinal microbiome in health and disease …
improving our understanding of the human intestinal microbiome in health and disease …
Host-microbe coevolution: applying evidence from model systems to complex marine invertebrate holobionts
Marine invertebrates often host diverse microbial communities, making it difficult to identify
important symbionts and to understand how these communities are structured. This …
important symbionts and to understand how these communities are structured. This …
[HTML][HTML] In situ identification of environmental microorganisms with Raman spectroscopy
Microorganisms in natural environments are crucial in maintaining the material and energy
cycle and the ecological balance of the environment. However, it is challenging to delineate …
cycle and the ecological balance of the environment. However, it is challenging to delineate …
Optofluidic Raman-activated cell sorting for targeted genome retrieval or cultivation of microbial cells with specific functions
Stable isotope labeling of microbial taxa of interest and their sorting provide an efficient and
direct way to answer the question “who does what?” in complex microbial communities …
direct way to answer the question “who does what?” in complex microbial communities …
Imaging commensal microbiota and pathogenic bacteria in the gut
L Lin, Y Du, J Song, W Wang… - Accounts of Chemical …, 2021 - ACS Publications
Conspectus As a newly discovered organ, gut microbiota has been extensively studied in
the last two decades, with their highly diverse and fundamental roles in the physiology of …
the last two decades, with their highly diverse and fundamental roles in the physiology of …
Imaging isotopically labeled bacteria at the single-cell level using high-resolution optical infrared photothermal spectroscopy
We report that the cellular uptake of stable isotope-labeled compounds by bacteria can be
probed at the single-cell level using infrared spectroscopy, and this monitors the chemical …
probed at the single-cell level using infrared spectroscopy, and this monitors the chemical …