The evolution of synthetic receptor systems

J Manhas, HI Edelstein, JN Leonard… - Nature chemical biology, 2022 - nature.com
Receptors enable cells to detect, process and respond to information about their
environments. Over the past two decades, synthetic biologists have repurposed physical …

[HTML][HTML] Customizing cellular signal processing by synthetic multi-level regulatory circuits

Y Gao, L Wang, B Wang - Nature Communications, 2023 - nature.com
As synthetic biology permeates society, the signal processing circuits in engineered living
systems must be customized to meet practical demands. Towards this mission, novel …

Synthetic biology for plant genetic engineering and molecular farming

Y Wang, GS Demirer - Trends in Biotechnology, 2023 - cell.com
Many efforts have been put into engineering plants to improve crop yields and stress
tolerance and boost the bioproduction of valuable molecules. Yet, our capabilities are still …

[HTML][HTML] A cybergenetic framework for engineering intein-mediated integral feedback control systems

S Anastassov, M Filo, CH Chang… - Nature …, 2023 - nature.com
The ability of biological systems to tightly regulate targeted variables, despite external and
internal disturbances, is known as Robust Perfect Adaptation (RPA). Achieved frequently …

[HTML][HTML] An endoribonuclease-based feedforward controller for decoupling resource-limited genetic modules in mammalian cells

RD Jones, Y Qian, V Siciliano, B DiAndreth… - Nature …, 2020 - nature.com
Synthetic biology has the potential to bring forth advanced genetic devices for applications
in healthcare and biotechnology. However, accurately predicting the behavior of engineered …

[HTML][HTML] Supercoiling-mediated feedback rapidly couples and tunes transcription

CP Johnstone, KE Galloway - Cell reports, 2022 - cell.com
Transcription induces a wave of DNA supercoiling, altering the binding affinity of RNA
polymerases and reshaping the biochemical landscape of gene regulation. As supercoiling …

Stability, robustness, and containment: preparing synthetic biology for real-world deployment

S Kumar, J Hasty - Current Opinion in Biotechnology, 2023 - Elsevier
Highlights•Environmentally responsive survival circuitry enable synthetic cell containment.•
Increased genetic stability by engineering sequence and host context.•Control circuits for …

Genetic effects on molecular network states explain complex traits

M Weith, J Großbach, M Clement‐Ziza… - Molecular Systems …, 2023 - embopress.org
The complexity of many cellular and organismal traits results from the integration of genetic
and environmental factors via molecular networks. Network structure and effect propagation …

Transient inhibition of lysosomal functions potentiates nucleic acid vaccines

C Wang, A Karlsson, TH Oguin III… - Proceedings of the …, 2023 - National Acad Sciences
Nucleic acid vaccines have shown promising results in the clinic against infectious diseases
and cancers. To robustly improve the vaccine efficacy and safety, we developed an …

[HTML][HTML] Context-aware synthetic biology by controller design: Engineering the mammalian cell

N Shakiba, RD Jones, R Weiss, D Del Vecchio - Cell systems, 2021 - cell.com
The rise of systems biology has ushered a new paradigm: the view of the cell as a system
that processes environmental inputs to drive phenotypic outputs. Synthetic biology provides …