A leaf-level spectral library to support high-throughput plant phenotyping: predictive accuracy and model transfer

NK Wijewardane, H Zhang, J Yang… - Journal of …, 2023 - academic.oup.com
Leaf-level hyperspectral reflectance has become an effective tool for high-throughput
phenotyping of plant leaf traits due to its rapid, low-cost, multi-sensing, and non-destructive …

[HTML][HTML] GWAS analysis and QTL identification of fiber quality traits and yield components in upland cotton using enriched high-density SNP markers

R Liu, J Gong, X Xiao, Z Zhang, J Li, A Liu… - Frontiers in Plant …, 2018 - frontiersin.org
It is of great importance to identify quantitative trait loci (QTL) controlling fiber quality traits
and yield components for future marker-assisted selection (MAS) and candidate gene …

From association to prediction: statistical methods for the dissection and selection of complex traits in plants

AE Lipka, CB Kandianis, ME Hudson, J Yu… - Current Opinion in Plant …, 2015 - Elsevier
Highlights•Controlling for spurious associations in statistical models is essential.•
Computationally efficient approaches are critical for large data sets.•Statistical genetic …

Sugars and jasmonic acid concentration in root exudates affect maize rhizosphere bacterial communities

LD Lopes, P Wang, SL Futrell… - Applied and …, 2022 - Am Soc Microbiol
Root exudates contribute to shaping the root-associated microbiomes, but it is unclear which
of the many exudate compounds are important in this process. Here, we focused on …

Genetic elucidation of interconnected antibiotic pathways mediating maize innate immunity

Y Ding, PR Weckwerth, E Poretsky, KM Murphy, J Sims… - Nature plants, 2020 - nature.com
Specialized metabolites constitute key layers of immunity that underlie disease resistance in
crops; however, challenges in resolving pathways limit our understanding of the functions …

[HTML][HTML] The Acid Phosphatase-Encoding Gene GmACP1 Contributes to Soybean Tolerance to Low-Phosphorus Stress

D Zhang, H Song, H Cheng, D Hao, H Wang… - PLoS …, 2014 - journals.plos.org
Phosphorus (P) is essential for all living cells and organisms, and low-P stress is a major
factor constraining plant growth and yield worldwide. In plants, P efficiency is a complex …

Quantitative genetics of the maize leaf microbiome

JG Wallace, KA Kremling, LL Kovar… - Phytobiomes …, 2018 - Am Phytopath Society
The degree to which the genotype of an organism can affect the composition of its
associated microbial communities (“microbiome”) varies by organism and habitat, and in …

Functional properties and quality characteristics of bioactive compounds in berries: Biochemistry, biotechnology, and genomics

SN Jimenez-Garcia, RG Guevara-Gonzalez… - Food Research …, 2013 - Elsevier
This review summarizes biological active compounds of berry fruits and their importance in
relation to human health. The group of bioactive compounds consists of phenolic …

[HTML][HTML] High throughput SNP discovery and genotyping in grapevine (Vitis vinifera L.) by combining a re-sequencing approach and SNPlex technology

D Lijavetzky, JA Cabezas, A Ibáñez, V Rodríguez… - BMC genomics, 2007 - Springer
Abstract Background Single-nucleotide polymorphisms (SNPs) are the most abundant type
of DNA sequence polymorphisms. Their higher availability and stability when compared to …

[HTML][HTML] Population Structure and Genetic Diversity in a Rice Core Collection (Oryza sativa L.) Investigated with SSR Markers

P Zhang, J Li, X Li, X Liu, X Zhao, Y Lu - PloS one, 2011 - journals.plos.org
The assessment of genetic diversity and population structure of a core collection would
benefit to make use of these germplasm as well as applying them in association mapping …