Recent progress and future directions in protein-protein docking
DW Ritchie - Current protein and peptide science, 2008 - ingentaconnect.com
This article gives an overview of recent progress in protein-protein docking and it identifies
several directions for future research. Recent results from the CAPRI blind docking …
several directions for future research. Recent results from the CAPRI blind docking …
NMR approaches for structural analysis of multidomain proteins and complexes in solution
NMR spectroscopy is a key method for studying the structure and dynamics of (large)
multidomain proteins and complexes in solution. It plays a unique role in integrated …
multidomain proteins and complexes in solution. It plays a unique role in integrated …
Identification of potential mutational hotspots in serratiopeptidase to address its poor pH tolerance issue
A Dhiman, R Purohit - Journal of Biomolecular Structure and …, 2023 - Taylor & Francis
Serratiopeptidase is the multifunctionality metalloendopeptidase extensively employed in
biopharmaceutical and industrial biotechnology. Despite its poor pH tolerance …
biopharmaceutical and industrial biotechnology. Despite its poor pH tolerance …
In silico molecular docking in DNA aptamer development
Aptamers are single-stranded DNA or RNA oligonucleotides generated by SELEX that
exhibit binding affinity and specificity against a wide variety of target molecules. Compared …
exhibit binding affinity and specificity against a wide variety of target molecules. Compared …
Protein–protein docking tested in blind predictions: the CAPRI experiment
J Janin - Molecular BioSystems, 2010 - pubs.rsc.org
Docking algorithms build multimolecular assemblies based on the subunit
structures.“Unbound” docking, which starts with the free molecules and allows for …
structures.“Unbound” docking, which starts with the free molecules and allows for …
Computational approaches for drug discovery
CL Hung, CC Chen - Drug development research, 2014 - Wiley Online Library
Abstract Preclinical Research Cellular proteins are the mediators of multiple organism
functions being involved in physiological mechanisms and disease. By discovering lead …
functions being involved in physiological mechanisms and disease. By discovering lead …
Protein–protein docking dealing with the unknown
IS Moreira, PA Fernandes… - Journal of computational …, 2010 - Wiley Online Library
Protein–protein binding is one of the critical events in biology, and knowledge of proteic
complexes three‐dimensional structures is of fundamental importance for the biochemical …
complexes three‐dimensional structures is of fundamental importance for the biochemical …
Spectroscopic, molecular modeling, and NMR-spectroscopic investigation of the binding mode of the natural alkaloids berberine and sanguinarine to human telomeric …
I Bessi, C Bazzicalupi, C Richter, HRA Jonker… - ACS chemical …, 2012 - ACS Publications
G-quadruplex structures can be formed at the single-stranded overhang of telomeric DNA,
and ligands able to stabilize this structure have recently been identified as potential …
and ligands able to stabilize this structure have recently been identified as potential …
DISPLAR: an accurate method for predicting DNA-binding sites on protein surfaces
Structural and physical properties of DNA provide important constraints on the binding sites
formed on surfaces of DNA-targeting proteins. Characteristics of such binding sites may form …
formed on surfaces of DNA-targeting proteins. Characteristics of such binding sites may form …
Histone H2AX: The missing link in AIF-mediated caspase-independent programmed necrosis
M Baritaud, H Boujrad, HK Lorenzo, S Krantic… - Cell cycle, 2010 - Taylor & Francis
Caspase-independent programmed necrosis is a highly regulated cellular demise that
displays morphological and biochemical necrotic hallmarks, such as an earlier permeability …
displays morphological and biochemical necrotic hallmarks, such as an earlier permeability …