Visible-light-mediated modification and manipulation of biomacromolecules

VM Lechner, M Nappi, PJ Deneny, S Folliet… - Chemical …, 2021 - ACS Publications
Chemically modified biomacromolecules─ ie, proteins, nucleic acids, glycans, and lipids─
have become crucial tools in chemical biology. They are extensively used not only to …

On the irrelevancy of hydroxyl radical to DNA damage from oxidative stress and implications for epigenetics

AM Fleming, CJ Burrows - Chemical Society Reviews, 2020 - pubs.rsc.org
Contrary to frequent reports in the literature, hydroxyl radical is not a key species
participating in endogenous oxidative DNA damage. Instead, carbonate radical anion is …

On the relevance of hydroxyl radical to purine DNA damage

C Chatgilialoglu, C Ferreri, MG Krokidis… - Free radical …, 2021 - Taylor & Francis
Hydroxyl radical (HO•) is the most reactive toward DNA among the reactive oxygen species
(ROS) generated in aerobic organisms by cellular metabolisms. HO• is generated also by …

One-electron oxidation reactions of purine and pyrimidine bases in cellular DNA

J Cadet, JR Wagner, V Shafirovich… - International journal of …, 2014 - Taylor & Francis
Purpose: The aim of this survey is to critically review the available information on one-
electron oxidation reactions of nucleobases in cellular DNA with emphasis on damage …

Formation and processing of DNA damage substrates for the hNEIL enzymes

AM Fleming, CJ Burrows - Free Radical Biology and Medicine, 2017 - Elsevier
Reactive oxygen species (ROS) are harnessed by the cell for signaling at the same time as
being detrimental to cellular components such as DNA. The genome and transcriptome …

G-quadruplex folds of the human telomere sequence alter the site reactivity and reaction pathway of guanine oxidation compared to duplex DNA

AM Fleming, CJ Burrows - Chemical research in toxicology, 2013 - ACS Publications
Telomere shortening occurs during oxidative and inflammatory stress with guanine (G) as
the major site of damage. In this work, a comprehensive profile of the sites of oxidation and …

Human NEIL3 Gene Expression Regulated by Epigenetic-Like Oxidative DNA Modification

AM Fleming, J Zhu, SA Howpay Manage… - Journal of the …, 2019 - ACS Publications
The NEIL3 DNA repair gene is induced in cells or animal models experiencing oxidative or
inflammatory stress along with oxidation of guanine (G) to 8-oxo-7, 8-dihydroguanine (OG) …

Ultrafast Formation of a Delocalized Triplet-Excited State in an Epigenetically Modified DNA Duplex under Direct UV Excitation

X Wang, L Martínez-Fernández, Y Zhang… - Journal of the …, 2024 - ACS Publications
Epigenetic modifications impart important functionality to nucleic acids during gene
expression but may increase the risk of photoinduced gene mutations. Thus, it is crucial to …

[HTML][HTML] On the epigenetic role of guanosine oxidation

M Giorgio, GI Dellino, V Gambino, PG Pelicci - Redox Biology, 2020 - Elsevier
Chemical modifications of DNA and RNA regulate genome functions or trigger mutagenesis
resulting in aging or cancer. Oxidations of macromolecules, including DNA, are common …

DNA–histone cross-link formation via hole trapping in nucleosome core particles

T Wen, M Kermarrec, E Dumont, N Gillet… - Journal of the …, 2023 - ACS Publications
Radical cations (holes) produced in DNA by ionizing radiation and other oxidants yield DNA–
protein cross-links (DPCs). Detailed studies of DPC formation in chromatin via this process …