LNA guanine and 2, 6-diaminopurine. Synthesis, characterization and hybridization properties of LNA 2, 6-diaminopurine containing oligonucleotides

C Rosenbohm, DS Pedersen, M Frieden… - Bioorganic & medicinal …, 2004 - Elsevier
LNA guanine and 2, 6-diaminopurine (D) phosphoramidites have been synthesized as
building blocks for antisense oligonucleotides (ON). The effects of incorporating LNA D into …

Stable Oligonucleotide‐Directed Triplex Formation at Target Sites with CG Interruptions: Strong Sequence‐Specific Recognition by 2′, 4′‐Bridged Nucleic‐Acid …

S Obika, Y Hari, M Sekiguchi… - Chemistry–A European …, 2002 - Wiley Online Library
A sequence of double‐stranded DNA (dsDNA) which can be recognized by a triplex‐forming
oligonucleotide (TFO) is limited to a homopurine–homopyrimidine sequence. To develop …

Synthesis of new modified DNAs by hyperthermophilic DNA polymerase: substrate and template specificity of functionalized thymidine analogues bearing an sp3 …

H Sawai, A Ozaki-Nakamura, M Mine… - Bioconjugate …, 2002 - ACS Publications
Novel thymidine analogue triphosphates, which have an sp3-hybridized carbon at the C5 α-
position with amino-linker arms, a methyl ester, or a carboxyl group at the C5 sidearm, were …

Modified DNA Bearing 5 (Methoxycarbonylmethyl)‐2′‐deoxyuridine: Preparation by PCR with Thermophilic DNA Polymerase and Postsynthetic Derivatization

M Mehedi Masud, A Ozaki‐Nakamura… - …, 2003 - Wiley Online Library
A thymidine analogue bearing a methyl ester at the C5 position was accepted as a substrate
by the thermophilic family B DNA polymerases, KOD Dash, Pwo, and Vent (exo−), to form …

Methods and compositions for treating neurological disease

N Aronin, P Zamore - US Patent 9,914,924, 2018 - Google Patents
HVYWMOMLDIMFJA-DPAQBDIFSA-N (3β)-Cholest-5-en-3-ol Chemical group C1C= C2C
[C@@ H](O) CC [C@] 2 (C)[C@@ H] 2 [C@@ H] 1 [C@@ H] 1CC [C@ H]([C@ H](C) CCCC …

Synthesis, cytotoxicity and antiviral activity studies of the conjugates of cobalt bis (1, 2-dicarbollide)(-I) with 5-ethynyl-2′-deoxyuridine and its cyclic derivatives

A Ilinova, A Semioshkin, I Lobanova, VI Bregadze… - Tetrahedron, 2014 - Elsevier
A series of novel conjugates of cobalt bis (1, 2-dicarbollide)(-I) with 5-ethynyl-2′-
deoxyuridine and its cyclic derivatives were synthesized. Conjugates with 5-ethynyl-2 …

A high-fidelity codon set for the T4 DNA ligase-catalyzed polymerization of modified oligonucleotides

Y Lei, D Kong, R Hili - ACS combinatorial science, 2015 - ACS Publications
In vitro selection of nucleic acid polymers can readily deliver highly specific receptors and
catalysts for a variety of applications; however, it is suspected that the functional group deficit …

Recognition of 5-aminouracil (U#) in the central strand of a DNA triplex: orientation selective binding of different third strand bases

VS Rana, KN Ganesh - Nucleic Acids Research, 2000 - academic.oup.com
A necessary feature of the natural base triads for triplex formation is the requirement of a
purine (A or G) in the central position, since only these provide sets of two hydrogen bond …

Pyrenylmethyldeoxyadenosine: A 3′‐Cap for Universal DNA Hybridization Probes

M Printz, C Richert - Chemistry–A European Journal, 2009 - Wiley Online Library
Abstract Effect of a PAH on base pairing: A polycyclic aromatic hydrocarbon (PAH)
covalently linked to the N6‐position of a dangling deoxyadenosine residue (see scheme) of …

Synthesis of modified oligonucleotides containing 4-guanidino-2-pyrimidinone nucleobases

J Robles, A Grandas, E Pedroso - Tetrahedron, 2001 - Elsevier
Oligonucleotides incorporating 4-guanidino-2-pyrimidinone nucleobases have been
prepared. These nucleobase analogues were designed to mimic the double hydrogen bond …