Structure and mechanism of DNA polymerase β
WA Beard, SH Wilson - Chemical reviews, 2006 - ACS Publications
Cells throughout nature contain multiple and overlapping DNA repair pathways that are
essential for maintaining the integrity of genomic DNA. 1, 2 The DNA repair pathway known …
essential for maintaining the integrity of genomic DNA. 1, 2 The DNA repair pathway known …
DNA polymerase family X: function, structure, and cellular roles
J Yamtich, JB Sweasy - Biochimica et Biophysica Acta (BBA)-Proteins and …, 2010 - Elsevier
The X family of DNA polymerases in eukaryotic cells consists of terminal transferase, and
DNA polymerases β, λ, and μ. These enzymes have similar structural portraits, yet different …
DNA polymerases β, λ, and μ. These enzymes have similar structural portraits, yet different …
De novo design of biocatalysts
The challenging field of de novo enzyme design is beginning to produce exciting results.
The application of powerful computational methods to functional protein design has recently …
The application of powerful computational methods to functional protein design has recently …
Influence of DNA structure on DNA polymerase β active site function: Extension of mutagenic DNA intermediates
WA Beard, DD Shock, SH Wilson - Journal of Biological Chemistry, 2004 - ASBMB
In the ternary substrate complex of DNA polymerase (pol) β, the nascent base pair
(templating and incoming nucleotides) is sandwiched between the duplex DNA terminus …
(templating and incoming nucleotides) is sandwiched between the duplex DNA terminus …
Regulation of DNA repair fidelity by molecular checkpoints:“gates” in DNA polymerase β's substrate selection
R Radhakrishnan, K Arora, Y Wang, WA Beard… - Biochemistry, 2006 - ACS Publications
With an increasing number of structural, kinetic, and modeling studies of diverse DNA
polymerases in various contexts, a complex dynamical view of how atomic motions might …
polymerases in various contexts, a complex dynamical view of how atomic motions might …
Engineered DNA polymerases in biotechnology
R Kranaster, A Marx - 2010 - kops.uni-konstanz.de
DNA polymerases are the enzymes that catalyse all DNA synthesis in Nature often with
astounding speed and accuracy. Consequently, their features as molecular machines are …
astounding speed and accuracy. Consequently, their features as molecular machines are …
Modulation of cellular response to cisplatin by a novel inhibitor of DNA polymerase β
F Boudsocq, P Benaim, Y Canitrot, M Knibiehler… - Molecular …, 2005 - ASPET
DNA polymerase β (Pol β) is an error-prone enzyme whose up-regulation has been shown
to be a genetic instability enhancer as well as a contributor to cisplatin resistance in tumor …
to be a genetic instability enhancer as well as a contributor to cisplatin resistance in tumor …
SNP-Associated Substitutions of Amino Acid Residues in the dNTP Selection Subdomain Decrease Polβ Polymerase Activity
OA Kladova, TE Tyugashev, AA Miroshnikov… - Biomolecules, 2024 - mdpi.com
In the cell, DNA polymerase β (Polβ) is involved in many processes aimed at maintaining
genome stability and is considered the main repair DNA polymerase participating in base …
genome stability and is considered the main repair DNA polymerase participating in base …
Engineering proteins that bind, move, make and break DNA
CH Collins, Y Yokobayashi, D Umeno… - Current opinion in …, 2003 - Elsevier
Recent protein engineering efforts have generated artificial transcription factors that bind
new target DNA sequences and enzymes that modify DNA at new target sites. Zinc-finger …
new target DNA sequences and enzymes that modify DNA at new target sites. Zinc-finger …
Directed evolution of novel polymerases
RC Holmberg, AA Henry, FE Romesberg - Biomolecular engineering, 2005 - Elsevier
DNA and RNA polymerases evolved to function in specific environments with specific
substrates to propagate genetic information in all living organisms. The commercial …
substrates to propagate genetic information in all living organisms. The commercial …