Role of NGS and SNP genotyping methods in sugarcane improvement programs

R Manimekalai, G Suresh… - Critical reviews in …, 2020 - Taylor & Francis
Sugarcane (Saccharum spp.) is one of the most economically significant crops because of
its high sucrose content and it is a promising biomass feedstock for biofuel production …

[HTML][HTML] A joint learning approach for genomic prediction in polyploid grasses

AH Aono, RCU Ferreira, ACL Moraes, LAC Lara… - Scientific reports, 2022 - nature.com
Poaceae, among the most abundant plant families, includes many economically important
polyploid species, such as forage grasses and sugarcane (Saccharum spp.). These species …

[HTML][HTML] The wild sugarcane and sorghum kinomes: Insights into expansion, diversification, and expression patterns

AH Aono, RJG Pimenta, ALB Garcia… - Frontiers in Plant …, 2021 - frontiersin.org
The protein kinase (PK) superfamily is one of the largest superfamilies in plants and the core
regulator of cellular signaling. Despite this substantial importance, the kinomes of sugarcane …

[HTML][HTML] Genome-Wide Analysis of the Auxin/Indoleacetic Acid (Aux/IAA) Gene Family in Autopolyploid Sugarcane (Saccharum spontaneum)

X Huang, MA Shad, Y Shu, S Nong, X Li, S Wu… - International Journal of …, 2024 - mdpi.com
The auxin/indoleacetic acid (Aux/IAA) family plays a central role in regulating gene
expression during auxin signal transduction. Nonetheless, there is limited knowledge …

Genome‐wide analysis of mitogen‐activated protein (MAP) kinase gene family expression in response to biotic and abiotic stresses in sugarcane

A Ali, N Chu, P Ma, T Javed, U Zaheer… - Physiologia …, 2021 - Wiley Online Library
To systematically analyze mitogen‐activated protein (MAP) kinase gene families and their
expression profiles in sugarcane (Saccharum spp. hybrids; Sh) under diverse biotic and …

[HTML][HTML] Genome-wide approaches for the identification of markers and genes associated with sugarcane yellow leaf virus resistance

RJG Pimenta, AH Aono, RCV Burbano, AE Coutinho… - Scientific Reports, 2021 - nature.com
Sugarcane yellow leaf (SCYL), caused by the sugarcane yellow leaf virus (SCYLV) is a
major disease affecting sugarcane, a leading sugar and energy crop. Despite damages …

[HTML][HTML] Molecular diversity and genetic structure of Saccharum complex accessions

C Medeiros, TWA Balsalobre, MS Carneiro - PLoS One, 2020 - journals.plos.org
Sugarcane is an important crop for food and energy security, providing sucrose and
bioethanol from sugar content and bioelectricity from lignocellulosic bagasse. In order to …

[HTML][HTML] Genetic variability, correlation among agronomic traits, and genetic progress in a sugarcane diversity panel

FZ Barreto, TWA Balsalobre, RG Chapola, AAF Garcia… - Agriculture, 2021 - mdpi.com
Sugarcane breeding programs require 15 years of experimentation to create more
productive cultivars, and estimates of genetic progress can indicate the efficiency of …

[HTML][HTML] Multiomic investigation of sugarcane mosaic virus resistance in sugarcane

RJG Pimenta, AH Aono, RCV Burbano, MF da Silva… - The Crop Journal, 2023 - Elsevier
Sugarcane mosaic virus (SCMV) is the main etiological agent of sugarcane mosaic disease,
which affects sugarcane and other grass crops. Despite the extensive characterization of …

[HTML][HTML] Machine learning approaches reveal genomic regions associated with sugarcane brown rust resistance

AH Aono, EA Costa, HVS Rody, JS Nagai… - Scientific reports, 2020 - nature.com
Sugarcane is an economically important crop, but its genomic complexity has hindered
advances in molecular approaches for genetic breeding. New cultivars are released based …