Ancient DNA analysis

L Orlando, R Allaby, P Skoglund… - Nature reviews …, 2021 - nature.com
Although the first ancient DNA molecules were extracted more than three decades ago, the
first ancient nuclear genomes could only be characterized after high-throughput sequencing …

Progress in forensic bone DNA analysis: Lessons learned from ancient DNA

M Hofreiter, J Sneberger, M Pospisek… - Forensic Science …, 2021 - Elsevier
Research on ancient and forensic DNA is related in many ways, and the two fields must deal
with similar obstacles. Therefore, communication between these two communities has the …

[图书][B] The archaeology of human bones

S Mays - 2021 - taylorfrancis.com
The Archaeology of Human Bones provides an up to date account of the analysis of human
skeletal remains from archaeological sites, introducing students to the anatomy of bones …

[HTML][HTML] Do I have something in my teeth? The trouble with genetic analyses of diet from archaeological dental calculus

AE Mann, JAF Yates, Z Fagernäs, RM Austin… - Quaternary …, 2023 - Elsevier
Dental calculus and other preserved microbiome substrates are an attractive target for
dietary reconstruction in past populations through a variety of physical, chemical, and …

A unified protocol for simultaneous extraction of DNA and proteins from archaeological dental calculus

Z Fagernäs, MI García-Collado, J Hendy… - Journal of …, 2020 - Elsevier
Archaeological materials are a finite resource, and efforts should be made to minimize
destructive analyses. This can be achieved by using protocols combining extraction of …

Dental calculus as a tool to study the evolution of the mammalian oral microbiome

JC Brealey, HG Leitão, T van der Valk… - Molecular biology …, 2020 - academic.oup.com
Dental calculus, the calcified form of the mammalian oral microbial plaque biofilm, is a rich
source of oral microbiome, host, and dietary biomolecules and is well preserved in museum …

Advancing and refining archaeological dental calculus research using multiomic frameworks

SL Wright, K Dobney, LS Weyrich - STAR: Science & Technology of …, 2021 - Taylor & Francis
Dental calculus (calcified dental plaque) is a cross-cultural biological matrix that is emerging
as a critical source of information for anthropologists and oral health professionals. It …

Understanding the microbial biogeography of ancient human dentitions to guide study design and interpretation

Z Fagernäs, DC Salazar-García… - FEMS …, 2022 - academic.oup.com
The oral cavity is a heterogeneous environment, varying in factors such as pH, oxygen
levels, and salivary flow. These factors affect the microbial community composition and …

Multiproxy analysis exploring patterns of diet and disease in dental calculus and skeletal remains from a 19th century Dutch population

BP Bartholdy, JB Hasselstrøm… - Peer Community …, 2024 - peercommunityjournal.org
Dental calculus is an excellent source of information on the dietary patterns of past
populations, including consumption of plant-based items. The detection of plant-derived …

decOM: similarity-based microbial source tracking of ancient oral samples using k-mer-based methods

C Duitama González, R Vicedomini, T Lemane… - Microbiome, 2023 - Springer
Background The analysis of ancient oral metagenomes from archaeological human and
animal samples is largely confounded by contaminant DNA sequences from modern and …