An overview of current population genomics methods for the analysis of whole‐genome resequencing data in eukaryotes

YXC Bourgeois, BH Warren - Molecular Ecology, 2021 - Wiley Online Library
Characterizing the population history of a species and identifying loci underlying local
adaptation is crucial in functional ecology, evolutionary biology, conservation and …

Rodent systematics in an age of discovery: recent advances and prospects

G D'Elía, PH Fabre, EP Lessa - Journal of Mammalogy, 2019 - academic.oup.com
Abstract With almost 2,600 species, Rodentia is the most diverse order of mammals. Here,
we provide an overview of changes in our understanding of the systematics of living rodents …

Extensive introgression and mosaic genomes of Mediterranean endemic lizards

W Yang, N Feiner, C Pinho, GM While… - Nature …, 2021 - nature.com
The Mediterranean basin is a hotspot of biodiversity, fuelled by climatic oscillation and
geological change over the past 20 million years. Wall lizards of the genus Podarcis are …

Genome-wide introgression among distantly related Heliconius butterfly species

W Zhang, KK Dasmahapatra, J Mallet, GRP Moreira… - Genome biology, 2016 - Springer
Background Although hybridization is thought to be relatively rare in animals, the raw
genetic material introduced via introgression may play an important role in fueling …

Admixture facilitates genetic adaptations to high altitude in Tibet

C Jeong, G Alkorta-Aranburu, B Basnyat… - Nature …, 2014 - nature.com
Admixture is recognized as a widespread feature of human populations, renewing interest in
the possibility that genetic exchange can facilitate adaptations to new environments. Studies …

How do species interactions affect evolutionary dynamics across whole communities?

TG Barraclough - Annual Review of Ecology, Evolution, and …, 2015 - annualreviews.org
Theories of how species evolve in changing environments mostly consider single species in
isolation or pairs of interacting species. Yet all organisms live in diverse communities …

Adaptive introgression between Anopheles sibling species eliminates a major genomic island but not reproductive isolation

CS Clarkson, D Weetman, J Essandoh… - Nature …, 2014 - nature.com
Adaptive introgression can provide novel genetic variation to fuel rapid evolutionary
responses, though it may be counterbalanced by potential for detrimental disruption of the …

The persistence of polymorphisms across species radiations

GA Jamie, JI Meier - Trends in Ecology & Evolution, 2020 - cell.com
Studies on polymorphisms have been foundational to our understanding of evolution. The
presence of different phenotypic morphs is sometimes considered a precursor to speciation …

Fitness maps to a large-effect locus in introduced stickleback populations

D Schluter, KB Marchinko… - Proceedings of the …, 2021 - National Acad Sciences
Mutations of small effect underlie most adaptation to new environments, but beneficial
variants with large fitness effects are expected to contribute under certain conditions. Genes …

Deleterious variation shapes the genomic landscape of introgression

BY Kim, CD Huber, KE Lohmueller - PLoS Genetics, 2018 - journals.plos.org
While it is appreciated that population size changes can impact patterns of deleterious
variation in natural populations, less attention has been paid to how gene flow affects and is …