[HTML][HTML] Open and reproducible neuroimaging: From study inception to publication
Empirical observations of how labs conduct research indicate that the adoption rate of open
practices for transparent, reproducible, and collaborative science remains in its infancy. This …
practices for transparent, reproducible, and collaborative science remains in its infancy. This …
Towards a biologically annotated brain connectome
The brain is a network of interleaved neural circuits. In modern connectomics, brain
connectivity is typically encoded as a network of nodes and edges, abstracting away the rich …
connectivity is typically encoded as a network of nodes and edges, abstracting away the rich …
[HTML][HTML] Time-dependent memory transformation in hippocampus and neocortex is semantic in nature
Memories undergo a time-dependent neural reorganization, which is assumed to be
accompanied by a transformation from detailed to more gist-like memory. However, the …
accompanied by a transformation from detailed to more gist-like memory. However, the …
[HTML][HTML] The integrity of dopaminergic and noradrenergic brain regions is associated with different aspects of late-life memory performance
MJ Dahl, SL Bachman, S Dutt, S Düzel, NC Bodammer… - Nature Aging, 2023 - nature.com
Abstract Changes in dopaminergic neuromodulation play a key role in adult memory
decline. Recent research has also implicated noradrenaline in shaping late-life memory …
decline. Recent research has also implicated noradrenaline in shaping late-life memory …
[HTML][HTML] Quality control in functional MRI studies with MRIQC and fMRIPrep
The implementation of adequate quality assessment (QA) and quality control (QC) protocols
within the magnetic resonance imaging (MRI) research workflow is resource-and time …
within the magnetic resonance imaging (MRI) research workflow is resource-and time …
[HTML][HTML] Continuous evaluation of denoising strategies in resting-state fMRI connectivity using fMRIPrep and Nilearn
HT Wang, SL Meisler, H Sharmarke… - PLOS Computational …, 2024 - journals.plos.org
Reducing contributions from non-neuronal sources is a crucial step in functional magnetic
resonance imaging (fMRI) connectivity analyses. Many viable strategies for denoising fMRI …
resonance imaging (fMRI) connectivity analyses. Many viable strategies for denoising fMRI …
NetPlotBrain: A Python package for visualizing networks and brains
S Fanton, WH Thompson - Network Neuroscience, 2023 - direct.mit.edu
Visualizations of networks are complex since they are multidimensional and generally
convey large amounts of information. The layout of the visualization can communicate either …
convey large amounts of information. The layout of the visualization can communicate either …
Functional reconfiguration of task-active frontoparietal control network facilitates abstract reasoning
While the brain's functional network architecture is largely conserved between resting and
task states, small but significant changes in functional connectivity support complex …
task states, small but significant changes in functional connectivity support complex …
Voxel‐wise intermodal coupling analysis of two or more modalities using local covariance decomposition
When individual subjects are imaged with multiple modalities, biological information is
present not only within each modality, but also between modalities–that is, in how modalities …
present not only within each modality, but also between modalities–that is, in how modalities …
[PDF][PDF] A reproducible benchmark of resting-state fMRI denoising strategies using fMRIPrep and Nilearn
Reducing contributions from non-neuronal sources is a crucial step in functional magnetic
resonance imaging (fMRI) connectivity analyses. Many viable strategies for denoising fMRI …
resonance imaging (fMRI) connectivity analyses. Many viable strategies for denoising fMRI …