Protein phosphorylation database and prediction tools
MX Zhao, Q Chen, F Li, S Fu, B Huang… - Briefings in …, 2023 - academic.oup.com
Protein phosphorylation, one of the main protein post-translational modifications, is required
for regulating various life activities. Kinases and phosphatases that regulate protein …
for regulating various life activities. Kinases and phosphatases that regulate protein …
Emerging technologies in adipose tissue research
Technologies are transforming the understanding of adipose tissue as a complex and
dynamic tissue that plays a critical role in energy homoeostasis and metabolic health. This …
dynamic tissue that plays a critical role in energy homoeostasis and metabolic health. This …
[HTML][HTML] Cryo-EM reveals how Hsp90 and FKBP immunophilins co-regulate the glucocorticoid receptor
CM Noddings, JL Johnson, DA Agard - Nature Structural & Molecular …, 2023 - nature.com
Hsp90 is an essential molecular chaperone responsible for the folding and activation of
hundreds of 'client'proteins, including the glucocorticoid receptor (GR). Previously, we …
hundreds of 'client'proteins, including the glucocorticoid receptor (GR). Previously, we …
CancerProteome: a resource to functionally decipher the proteome landscape in cancer
D Lv, D Li, Y Cai, J Guo, S Chu, J Yu, K Liu… - Nucleic Acids …, 2024 - academic.oup.com
Advancements in mass spectrometry (MS)-based proteomics have greatly facilitated the
large-scale quantification of proteins and microproteins, thereby revealing altered signalling …
large-scale quantification of proteins and microproteins, thereby revealing altered signalling …
A Review of Machine Learning and Algorithmic Methods for Protein Phosphorylation Site Prediction
F Esmaili, M Pourmirzaei, S Ramazi… - Genomics …, 2023 - academic.oup.com
Post-translational modifications (PTMs) have key roles in extending the functional diversity
of proteins and, as a result, regulating diverse cellular processes in prokaryotic and …
of proteins and, as a result, regulating diverse cellular processes in prokaryotic and …
Artificial intelligence for neurodegenerative experimental models
INTRODUCTION Experimental models are essential tools in neurodegenerative disease
research. However, the translation of insights and drugs discovered in model systems has …
research. However, the translation of insights and drugs discovered in model systems has …
GPS-SUMO 2.0: an updated online service for the prediction of SUMOylation sites and SUMO-interacting motifs
Y Gou, D Liu, M Chen, Y Wei, X Huang… - Nucleic Acids …, 2024 - academic.oup.com
Small ubiquitin-like modifiers (SUMOs) are tiny but important protein regulators involved in
orchestrating a broad spectrum of biological processes, either by covalently modifying …
orchestrating a broad spectrum of biological processes, either by covalently modifying …
SPOP promotes CREB5 ubiquitination to inhibit MET signaling in liver cancer
D Gong, P Zhou, W Chang, J Yang, Y Zhang… - … et Biophysica Acta (BBA …, 2024 - Elsevier
Liver cancer is ranked as the sixth most prevalent from of malignancy globally and stands as
the third primary contributor to cancer-related mortality. Metastasis is the main reason for …
the third primary contributor to cancer-related mortality. Metastasis is the main reason for …
[HTML][HTML] A plant protein farnesylation system in prokaryotic cells reveals Arabidopsis AtJ3 produced and farnesylated in E. coli maintains its function of protecting …
JR Wu, R Zohra, NKT Duong, CH Yeh, CA Lu, SJ Wu - Plant Methods, 2023 - Springer
Background Protein farnesylation involves the addition of a 15-carbon polyunsaturated
farnesyl group to proteins whose C-terminus ends with a CaaX motif. This post-translational …
farnesyl group to proteins whose C-terminus ends with a CaaX motif. This post-translational …
PhosBoost: Improved phosphorylation prediction recall using gradient boosting and protein language models
Protein phosphorylation is a dynamic and reversible post‐translational modification that
regulates a variety of essential biological processes. The regulatory role of phosphorylation …
regulates a variety of essential biological processes. The regulatory role of phosphorylation …