In silico methods and tools for drug discovery
In the past, conventional drug discovery strategies have been successfully employed to
develop new drugs, but the process from lead identification to clinical trials takes more than …
develop new drugs, but the process from lead identification to clinical trials takes more than …
[HTML][HTML] Machine learning in chemoinformatics and drug discovery
Highlights•Chemical graph theory and descriptors in drug discovery.•Chemical fingerprint
and similarity analysis.•Machine learning models for virtual screening.•Future challenges …
and similarity analysis.•Machine learning models for virtual screening.•Future challenges …
Computational/in silico methods in drug target and lead prediction
FE Agamah, GK Mazandu, R Hassan… - Briefings in …, 2020 - academic.oup.com
Drug-like compounds are most of the time denied approval and use owing to the
unexpected clinical side effects and cross-reactivity observed during clinical trials. These …
unexpected clinical side effects and cross-reactivity observed during clinical trials. These …
Integration of virtual and high-throughput screening
J Bajorath - Nature Reviews Drug Discovery, 2002 - nature.com
High-throughput and virtual screening are important components of modern drug discovery
research. Typically, these screening technologies are considered distinct approaches, as …
research. Typically, these screening technologies are considered distinct approaches, as …
Graph kernels for chemical informatics
Increased availability of large repositories of chemical compounds is creating new
challenges and opportunities for the application of machine learning methods to problems in …
challenges and opportunities for the application of machine learning methods to problems in …
Maximum common subgraph isomorphism algorithms for the matching of chemical structures
JW Raymond, P Willett - Journal of computer-aided molecular design, 2002 - Springer
The maximum common subgraph (MCS) problem has become increasingly important in
those aspects of chemoinformatics that involve the matching of 2D or 3D chemical …
those aspects of chemoinformatics that involve the matching of 2D or 3D chemical …
Comparison of fingerprint-based methods for virtual screening using multiple bioactive reference structures
Fingerprint-based similarity searching is widely used for virtual screening when only a single
bioactive reference structure is available. This paper reviews three distinct ways of carrying …
bioactive reference structure is available. This paper reviews three distinct ways of carrying …
[HTML][HTML] Lazar: a modular predictive toxicology framework
A Maunz, M Gütlein, M Rautenberg… - Frontiers in …, 2013 - frontiersin.org
lazar (lazy structure–activity relationships) is a modular framework for predictive toxicology.
Similar to the read across procedure in toxicological risk assessment, lazar creates local …
Similar to the read across procedure in toxicological risk assessment, lazar creates local …
A binary linear programming formulation of the graph edit distance
D Justice, A Hero - IEEE Transactions on Pattern Analysis and …, 2006 - ieeexplore.ieee.org
A binary linear programming formulation of the graph edit distance for unweighted,
undirected graphs with vertex attributes is derived and applied to a graph recognition …
undirected graphs with vertex attributes is derived and applied to a graph recognition …