Intrinsically disordered proteins: an overview
R Trivedi, HA Nagarajaram - International journal of molecular sciences, 2022 - mdpi.com
Many proteins and protein segments cannot attain a single stable three-dimensional
structure under physiological conditions; instead, they adopt multiple interconverting …
structure under physiological conditions; instead, they adopt multiple interconverting …
E3 ligase ligand chemistries: from building blocks to protein degraders
In recent years, proteolysis-targeting chimeras (PROTACs), capable of achieving targeted
protein degradation, have proven their great therapeutic potential and usefulness as …
protein degradation, have proven their great therapeutic potential and usefulness as …
flDPnn: Accurate intrinsic disorder prediction with putative propensities of disorder functions
G Hu, A Katuwawala, K Wang, Z Wu… - Nature …, 2021 - nature.com
Identification of intrinsic disorder in proteins relies in large part on computational predictors,
which demands that their accuracy should be high. Since intrinsic disorder carries out a …
which demands that their accuracy should be high. Since intrinsic disorder carries out a …
AlphaFold illuminates half of the dark human proteins
JL Binder, J Berendzen, AO Stevens, Y He… - Current Opinion in …, 2022 - Elsevier
We investigate the use of confidence scores to evaluate the accuracy of a given AlphaFold
(AF2) protein model for drug discovery. Prediction of accuracy is improved by not …
(AF2) protein model for drug discovery. Prediction of accuracy is improved by not …
Intrinsically disordered proteins and biomolecular condensates as drug targets
M Biesaga, M Frigolé-Vivas, X Salvatella - Current Opinion in Chemical …, 2021 - Elsevier
Intrinsically disordered domains represent attractive therapeutic targets because they play
key roles in cancer, as well as in neurodegenerative and infectious diseases. They are …
key roles in cancer, as well as in neurodegenerative and infectious diseases. They are …
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation
Abstract The Database of Intrinsically Disordered Proteins (DisProt, URL: https://disprot. org)
is the major repository of manually curated annotations of intrinsically disordered proteins …
is the major repository of manually curated annotations of intrinsically disordered proteins …
NUPR1 inhibitor ZZW-115 induces ferroptosis in a mitochondria-dependent manner
C Huang, P Santofimia-Castaño, X Liu, Y Xia… - Cell death …, 2021 - nature.com
Ferroptosis is an iron-dependent cell death characterized by the accumulation of
hydroperoxided phospholipids. Here, we report that the NUPR1 inhibitor ZZW-115 induces …
hydroperoxided phospholipids. Here, we report that the NUPR1 inhibitor ZZW-115 induces …
Targeting key proteins involved in transcriptional regulation for cancer therapy: Current strategies and future prospective
H Pei, W Guo, Y Peng, H Xiong… - Medicinal Research …, 2022 - Wiley Online Library
The key proteins involved in transcriptional regulation play convergent roles in cellular
homeostasis, and their dysfunction mediates aberrant gene expressions that underline the …
homeostasis, and their dysfunction mediates aberrant gene expressions that underline the …
Deep learning in prediction of intrinsic disorder in proteins
Intrinsic disorder prediction is an active area that has developed over 100 predictors. We
identify and investigate a recent trend towards the development of deep neural network …
identify and investigate a recent trend towards the development of deep neural network …
Rational drug design targeting intrinsically disordered proteins
Intrinsically disordered proteins (IDPs) are proteins that perform important biological
functions without well‐defined structures under physiological conditions. IDPs can form …
functions without well‐defined structures under physiological conditions. IDPs can form …