Global non-random abundance of short tandem repeats in rodents and primates

M Arabfard, M Salesi, YH Nourian, I Arabipour… - bioRxiv, 2021 - biorxiv.org
Background While of predominant abundance across vertebrate genomes and significant
biological implications, the relevance of short tandem repeat (STR) abundance to speciation …

The variable ELF3 polyglutamine tract mediates complex epistatic interactions in Arabidopsis thaliana

Maximilian Oliver Press, C Queitsch - bioRxiv, 2016 - biorxiv.org
Short tandem repeats are hypervariable genetic elements that occur frequently in coding
regions. Their high mutation rate readily generates genetic variation contributing to adaptive …

[PDF][PDF] A primate-specific (GCC) repeat in the untranslated region of SMAD9 undergoes natural selection and links with late-onset neurocognitive disorder in human

S Alizadeh, S Khamse, H Afshar, KK HR, A Delbari… - 2022 - scholar.archive.org
Across numerous primate species and tissues, SMAD9 (SMAD Family Member 9) gene,
reaches the highest level of expression in the human brain. This gene contains a short …

[图书][B] Methods for studying the genome-wide landscape of tandem repeats

N Mousavi - 2021 - search.proquest.com
Abstract Tandem Repeats (TRs) are a class of genetic variants formed by motifs of 1-20
nucleotides repeating in tandem. Previous studies show that expansion at specific TR loci is …

Metagenomics Analyses: A Qualitative Assessment Tool for Applications in Forensic Sciences

D Dileep, A Ramesh, A Sojan, DS Dhanjal… - Metagenomics …, 2020 - Springer
Forensic science deals with the scientific investigation of evidence collected from crime
scenes. Since decades, forensic scientists have solved complex and sophisticated crimes …

Retrospective cell lineage reconstruction in Humans using short tandem repeats

L Tao, O Raz, Z Marx, M Gosh, S Huber… - bioRxiv, 2017 - biorxiv.org
Cell lineage analysis aims to uncover the developmental history of an organism back to its
cell of origin. Recently, novel in vivo methods and technologies utilizing genome editing …

[图书][B] Measurement and phenotypic consequences of ribosomal DNA copy number variation

AN Hall - 2021 - search.proquest.com
The ribosomal DNA (rDNA) encodes the ribosomal RNAs and is present in tens to
thousands of tandemly repeated copies in eukaryotic genomes. rDNA copy number varies …

[PDF][PDF] Aquaculture and Fisheries

JJ Sánchez-Velásquez, PN Pinedo-Bernal… - uns.edu.pe
Paralichthys adspersus is a native species from the Pacific coast of South America that is of
great economic importance for Peruvian aquaculture. Even though establishing sustainable …

Evolution of Old World monkeys and great apes links to massive and directional shrinkage of the dinucleotide short tandem repeat compartment

M Arabfard, M Salesi, I Arabipour, M Ohadi - 2021 - researchsquare.com
Background: The evolutionary trend of short tandem repeats (STRs) at the crossroads of
speciation remains largely elusive and attributed to random evolution for the most part. To …

Primate Speciation Links to Massive and Directional Shrinkage of the Dinucleotide Short Tandem Repeat Compartment.

M Arabfard, M Salesi, I Arabipour, R Najafipour… - 2021 - researchsquare.com
The evolutionary trend of short tandem repeats (STRs) at the crossroads of speciation
remains largely elusive and attributed to random evolution for the most part. Here we …