[HTML][HTML] Image harmonization: A review of statistical and deep learning methods for removing batch effects and evaluation metrics for effective harmonization

F Hu, AA Chen, H Horng, V Bashyam, C Davatzikos… - NeuroImage, 2023 - Elsevier
Magnetic resonance imaging and computed tomography from multiple batches (eg sites,
scanners, datasets, etc.) are increasingly used alongside complex downstream analyses to …

Fluid ejections in nature

EJ Challita, P Rohilla, MS Bhamla - Annual Review of Chemical …, 2024 - annualreviews.org
From microscopic fungi to colossal whales, fluid ejections are universal and intricate
phenomena in biology, serving vital functions such as animal excretion, venom spraying …

[HTML][HTML] Cross-site harmonization of multi-shell diffusion MRI measures based on rotational invariant spherical harmonics (RISH)

A De Luca, SC Karayumak, A Leemans, Y Rathi… - NeuroImage, 2022 - Elsevier
Quantification methods based on the acquisition of diffusion magnetic resonance imaging
(dMRI) with multiple diffusion weightings (eg, multi-shell) are becoming increasingly applied …

[HTML][HTML] Determining the OPTIMAL DTI analysis method for application in cerebral small vessel disease

M Egle, S Hilal, AM Tuladhar, L Pirpamer, S Bell… - NeuroImage: Clinical, 2022 - Elsevier
Background DTI is sensitive to white matter (WM) microstructural damage and has been
suggested as a surrogate marker for phase 2 clinical trials in cerebral small vessel disease …

[HTML][HTML] Multimodal tract-based MRI metrics outperform whole brain markers in determining cognitive impact of small vessel disease-related brain injury

A De Luca, H Kuijf, L Exalto… - Brain Structure and …, 2022 - Springer
In cerebral small vessel disease (cSVD), whole brain MRI markers of cSVD-related brain
injury explain limited variance to support individualized prediction. Here, we investigate …

Evaluation of mean shift, ComBat, and CycleGAN for harmonizing brain connectivity matrices across sites

H Xu, NR Newlin, ME Kim, C Gao… - Medical Imaging …, 2024 - spiedigitallibrary.org
Connectivity matrices derived from diffusion MRI (dMRI) provide an interpretable and
generalizable way of understanding the human brain connectome. However, dMRI suffers …

[HTML][HTML] Improved sensitivity and precision in multicentre diffusion MRI network analysis using thresholding and harmonization

BM de Brito Robalo, A de Luca, C Chen, A Dewenter… - NeuroImage: Clinical, 2022 - Elsevier
Purpose To investigate if network thresholding and raw data harmonization improve
consistency of diffusion MRI (dMRI)-based brain networks while also increasing precision …

Cross-site harmonization of diffusion MRI data without matched training subjects

A De Luca, T Swartenbroekx, H Seelaar… - bioRxiv, 2024 - biorxiv.org
Diffusion MRI (dMRI) data typically suffer of marked cross-site variability, which prevents
naively performing pooled analyses. To attenuate cross-site variability, harmonization …