Best practices in metabarcoding of fungi: from experimental design to results
The development of high‐throughput sequencing (HTS) technologies has greatly improved
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …
Fungal identification using molecular tools: a primer for the natural products research community
Fungi are morphologically, ecologically, metabolically, and phylogenetically diverse. They
are known to produce numerous bioactive molecules, which makes them very useful for …
are known to produce numerous bioactive molecules, which makes them very useful for …
Global ecosystem thresholds driven by aridity
M Berdugo, M Delgado-Baquerizo, S Soliveres… - Science, 2020 - science.org
Aridity, which is increasing worldwide because of climate change, affects the structure and
functioning of dryland ecosystems. Whether aridification leads to gradual (versus abrupt) …
functioning of dryland ecosystems. Whether aridification leads to gradual (versus abrupt) …
[HTML][HTML] Fungal-bacterial diversity and microbiome complexity predict ecosystem functioning
The soil microbiome is highly diverse and comprises up to one quarter of Earth's diversity.
Yet, how such a diverse and functionally complex microbiome influences ecosystem …
Yet, how such a diverse and functionally complex microbiome influences ecosystem …
[PDF][PDF] Supplementation with a probiotic mixture accelerates gut microbiome maturation and reduces intestinal inflammation in extremely preterm infants
J Samara, S Moossavi, B Alshaikh, VA Ortega… - Cell host & …, 2022 - cell.com
Probiotics are increasingly administered to premature infants to prevent necrotizing
enterocolitis and neonatal sepsis. However, their effects on gut microbiome assembly and …
enterocolitis and neonatal sepsis. However, their effects on gut microbiome assembly and …
The role of multiple global change factors in driving soil functions and microbial biodiversity
Soils underpin terrestrial ecosystem functions, but they face numerous anthropogenic
pressures. Despite their crucial ecological role, we know little about how soils react to more …
pressures. Despite their crucial ecological role, we know little about how soils react to more …
[HTML][HTML] Plant developmental stage drives the differentiation in ecological role of the maize microbiome
Background Plants live with diverse microbial communities which profoundly affect multiple
facets of host performance, but if and how host development impacts the assembly, functions …
facets of host performance, but if and how host development impacts the assembly, functions …
The global contribution of soil mosses to ecosystem services
Soil mosses are among the most widely distributed organisms on land. Experiments and
observations suggest that they contribute to terrestrial soil biodiversity and function, yet their …
observations suggest that they contribute to terrestrial soil biodiversity and function, yet their …
[HTML][HTML] Disease-induced changes in plant microbiome assembly and functional adaptation
Background The plant microbiome is an integral part of the host and increasingly recognized
as playing fundamental roles in plant growth and health. Increasing evidence indicates that …
as playing fundamental roles in plant growth and health. Increasing evidence indicates that …
[HTML][HTML] Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2's q2-feature-classifier plugin
Background Taxonomic classification of marker-gene sequences is an important step in
microbiome analysis. Results We present q2-feature-classifier (https://github. com/qiime2/q2 …
microbiome analysis. Results We present q2-feature-classifier (https://github. com/qiime2/q2 …