Microbial activity in forest soil reflects the changes in ecosystem properties between summer and winter
L Žifčáková, T Větrovský, A Howe… - Environmental …, 2016 - Wiley Online Library
Understanding the ecology of coniferous forests is very important because these
environments represent globally largest carbon sinks. Metatranscriptomics, microbial …
environments represent globally largest carbon sinks. Metatranscriptomics, microbial …
Sequence depth, not PCR replication, improves ecological inference from next generation DNA sequencing
DP Smith, KG Peay - PloS one, 2014 - journals.plos.org
Recent advances in molecular approaches and DNA sequencing have greatly progressed
the field of ecology and allowed for the study of complex communities in unprecedented …
the field of ecology and allowed for the study of complex communities in unprecedented …
PacBio metabarcoding of Fungi and other eukaryotes: errors, biases and perspectives
L Tedersoo, A Tooming‐Klunderud… - New Phytologist, 2018 - Wiley Online Library
Second‐generation, high‐throughput sequencing methods have greatly improved our
understanding of the ecology of soil microorganisms, yet the short barcodes (< 500 bp) …
understanding of the ecology of soil microorganisms, yet the short barcodes (< 500 bp) …
Comparison and validation of some ITS primer pairs useful for fungal metabarcoding studies
Current metabarcoding studies aiming to characterize microbial communities generally rely
on the amplification and sequencing of relatively short DNA regions. For fungi, the internal …
on the amplification and sequencing of relatively short DNA regions. For fungi, the internal …
Phyllosphere epiphytic and endophytic fungal community and network structures differ in a tropical mangrove ecosystem
H Yao, X Sun, C He, P Maitra, XC Li, LD Guo - Microbiome, 2019 - Springer
Background Revealing the relationship between plants and fungi is very important in
understanding biodiversity maintenance, community stability, and ecosystem functioning …
understanding biodiversity maintenance, community stability, and ecosystem functioning …
Drought consistently alters the composition of soil fungal and bacterial communities in grasslands from two continents
R Ochoa‐Hueso, SL Collins… - Global change …, 2018 - Wiley Online Library
The effects of short‐term drought on soil microbial communities remain largely unexplored,
particularly at large scales and under field conditions. We used seven experimental sites …
particularly at large scales and under field conditions. We used seven experimental sites …
A group of ectomycorrhizal fungi restricts organic matter accumulation in boreal forest
BD Lindahl, J Kyaschenko, K Varenius… - Ecology …, 2021 - Wiley Online Library
Boreal forest soils are important global carbon sinks, with significant storage in the organic
topsoil. Decomposition of these stocks requires oxidative enzymes, uniquely produced by …
topsoil. Decomposition of these stocks requires oxidative enzymes, uniquely produced by …
Using environmental DNA to census marine fishes in a large mesocosm
The ocean is a soup of its resident species' genetic material, cast off in the forms of
metabolic waste, shed skin cells, or damaged tissue. Sampling this environmental DNA …
metabolic waste, shed skin cells, or damaged tissue. Sampling this environmental DNA …
Bioinformatics matters: The accuracy of plant and soil fungal community data is highly dependent on the metabarcoding pipeline
Fungal communities associated with plants and soil influence plant fitness and ecosystem
functioning. They are frequently studied by metabarcoding approaches targeting the …
functioning. They are frequently studied by metabarcoding approaches targeting the …
Increased yield and CO2 sequestration potential with the C4 cereal Sorghum bicolor cultivated in basaltic rock dust‐amended agricultural soil
ME Kelland, PW Wade, AL Lewis… - Global Change …, 2020 - Wiley Online Library
Land‐based enhanced rock weathering (ERW) is a biogeochemical carbon dioxide removal
(CDR) strategy aiming to accelerate natural geological processes of carbon sequestration …
(CDR) strategy aiming to accelerate natural geological processes of carbon sequestration …