Forgotten fungi—the gut mycobiome in human health and disease

CE Huseyin, PW O'Toole, PD Cotter… - FEMS Microbiology …, 2017 - academic.oup.com
The human body is home to a complex and diverse microbial ecosystem that plays a central
role in host health. This includes a diversity of fungal species that is collectively referred to …

Environmental microbiota drives microbial succession and metabolic profiles during Chinese liquor fermentation

X Wang, H Du, Y Zhang, Y Xu - Applied and environmental …, 2018 - Am Soc Microbiol
Many microorganisms in the environment participate in the fermentation process of Chinese
liquor. However, it is unknown to what extent the environmental microbiota influences …

Bees under interactive stressors: the novel insecticides flupyradifurone and sulfoxaflor along with the fungicide azoxystrobin disrupt the gut microbiota of honey bees …

Y Al Naggar, B Singavarapu, RJ Paxton… - Science of the Total …, 2022 - Elsevier
The gut microbiome plays an important role in bee health and disease. But it can be
disrupted by pesticides and in-hive chemicals, putting honey bee health in danger. We used …

Fungal dysbiosis in mucosa-associated microbiota of Crohn's disease patients

G Liguori, B Lamas, ML Richard… - Journal of Crohn's …, 2016 - academic.oup.com
Abstract Background and Aims: Gut microbiota is involved in many physiological functions
and its imbalance is associated with several diseases, particularly with inflammatory bowel …

[HTML][HTML] Pervasive associations between dark septate endophytic fungi with tree root and soil microbiomes across Europe

T Netherway, J Bengtsson, F Buegger… - Nature …, 2024 - nature.com
Trees interact with a multitude of microbes through their roots and root symbionts such as
mycorrhizal fungi and root endophytes. Here, we explore the role of fungal root symbionts as …

Improved selection of internal transcribed spacer-specific primers enables quantitative, ultra-high-throughput profiling of fungal communities

NA Bokulich, DA Mills - Applied and environmental microbiology, 2013 - Am Soc Microbiol
Ultra-high-throughput sequencing (HTS) of fungal communities has been restricted by short
read lengths and primer amplification bias, slowing the adoption of newer sequencing …

Ecological and genomic responses of soil microbiomes to high-severity wildfire: linking community assembly to functional potential

NC Dove, N Taş, SC Hart - The ISME Journal, 2022 - academic.oup.com
Increasing wildfire severity, which is common throughout the western United States, can
have deleterious effects on plant regeneration and large impacts on carbon (C) and nitrogen …

Changes in fungal communities along a boreal forest soil fertility gradient

E Sterkenburg, A Bahr, M Brandström Durling… - New …, 2015 - Wiley Online Library
Boreal forests harbour diverse fungal communities with decisive roles in decomposition and
plant nutrition. Although changes in boreal plant communities along gradients in soil acidity …

Broadscale ecological patterns are robust to use of exact sequence variants versus operational taxonomic units

SI Glassman, JBH Martiny - MSphere, 2018 - Am Soc Microbiol
Recent discussion focuses on the best method for delineating microbial taxa, based on
either exact sequence variants (ESVs) or traditional operational taxonomic units (OTUs) of …

Shift in fungal communities and associated enzyme activities along an age gradient of managed Pinus sylvestris stands

J Kyaschenko, KE Clemmensen, A Hagenbo… - The ISME …, 2017 - academic.oup.com
Forestry reshapes ecosystems with respect to tree age structure, soil properties and
vegetation composition. These changes are likely to be paralleled by shifts in microbial …