The first microbial colonizers of the human gut: composition, activities, and health implications of the infant gut microbiota

C Milani, S Duranti, F Bottacini, E Casey… - Microbiology and …, 2017 - Am Soc Microbiol
The human gut microbiota is engaged in multiple interactions affecting host health during
the host's entire life span. Microbes colonize the neonatal gut immediately following birth …

[HTML][HTML] Stereotypic immune system development in newborn children

A Olin, E Henckel, Y Chen, T Lakshmikanth, C Pou… - Cell, 2018 - cell.com
Epidemiological data suggest that early life exposures are key determinants of immune-
mediated disease later in life. Young children are also particularly susceptible to infections …

[HTML][HTML] The human gut microbiome: from association to modulation

TSB Schmidt, J Raes, P Bork - Cell, 2018 - cell.com
Our understanding of the human gut microbiome continues to evolve at a rapid pace, but
practical application of thisknowledge is still in its infancy. This review discusses the type of …

The gastrointestinal microbiome: a review

PC Barko, MA McMichael, KS Swanson… - Journal of veterinary …, 2018 - Wiley Online Library
The gastrointestinal microbiome is a diverse consortium of bacteria, archaea, fungi,
protozoa, and viruses that inhabit the gut of all mammals. Studies in humans and other …

Maturation of the infant microbiome community structure and function across multiple body sites and in relation to mode of delivery

DM Chu, J Ma, AL Prince, KM Antony, MD Seferovic… - Nature medicine, 2017 - nature.com
Human microbial communities are characterized by their taxonomic, metagenomic and
metabolic diversity, which varies by distinct body sites and influences human physiology …

Association between breast milk bacterial communities and establishment and development of the infant gut microbiome

PS Pannaraj, F Li, C Cerini, JM Bender, S Yang… - JAMA …, 2017 - jamanetwork.com
Importance Establishment of the infant microbiome has lifelong implications on health and
immunity. Gut microbiota of breastfed compared with nonbreastfed individuals differ during …

Gut biogeography of the bacterial microbiota

GP Donaldson, SM Lee, SK Mazmanian - Nature Reviews Microbiology, 2016 - nature.com
Animals assemble and maintain a diverse but host-specific gut microbial community. In
addition to characteristic microbial compositions along the longitudinal axis of the intestines …

[HTML][HTML] Dynamics and stabilization of the human gut microbiome during the first year of life

F Bäckhed, J Roswall, Y Peng, Q Feng, H Jia… - Cell host & …, 2015 - cell.com
The gut microbiota is central to human health, but its establishment in early life has not been
quantitatively and functionally examined. Applying metagenomic analysis on fecal samples …

[HTML][HTML] The effects of antibiotics on the microbiome throughout development and alternative approaches for therapeutic modulation

A Langdon, N Crook, G Dantas - Genome medicine, 2016 - Springer
The widespread use of antibiotics in the past 80 years has saved millions of human lives,
facilitated technological progress and killed incalculable numbers of microbes, both …

Analysis of composition of microbiomes: a novel method for studying microbial composition

S Mandal, W Van Treuren, RA White… - Microbial ecology in …, 2015 - Taylor & Francis
Background Understanding the factors regulating our microbiota is important but requires
appropriate statistical methodology. When comparing two or more populations most existing …